RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 B3GNT7Q8NFL0 401 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 CEP70Q8NHQ1 597 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 C8orf44Q96CB5 159 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 PPCDCQ96CD2 204 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 TM4SF18Q96CE8 201 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 LMF1Q96S06 567 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 MMP25Q9NPA2 562 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 STMN3Q9NZ72 180 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 SH3BP4Q9P0V3 963 aa11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 HEMK1Q9Y5R4 338 aaPredicted RBP11.77□□□□□ -0.53
CLNS1A-201ENST00000263309 ACACAQ13085 2346 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 A0A1B0GTL3 188 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 A0A1W2PR48 441 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 SAGE2PA6NJ88 616 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 ITM2AO43736 263 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 AIFM1O95831 613 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 VIMP08670 466 aaKnown RBP11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 IL3P08700 152 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 COX6A1P12074 109 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 DDCP20711 480 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 GPC1P35052 558 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 HTR6P50406 440 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 CLNS1AP54105 237 aaKnown RBP11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 ERVK-8P63133 956 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 PSPHP78330 225 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 LRRC74AQ0VAA2 488 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 LACTB2Q53H82 288 aaPredicted RBP11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 C18orf63Q68DL7 685 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 TCTN3Q6NUS6 607 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC48A1Q6P1K1 146 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 HSDL2Q6YN16 418 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 SCUBE1Q8IWY4 988 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 GALNT12Q8IXK2 581 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 LRRC25Q8N386 305 aaPredicted RBP11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 OR6Y1Q8NGX8 325 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 CKAP2Q8WWK9 683 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 RILPQ96NA2 401 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 EBPLQ9BY08 206 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 NUF2Q9BZD4 464 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 DPY30Q9C005 99 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 BRINP2Q9C0B6 783 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC25A18Q9H1K4 315 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 MYNNQ9NPC7 610 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 PRODH2Q9UF12 536 aa11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 POLR3HQ9Y535 204 aaPredicted RBP11.76□□□□□ -0.53
CLNS1A-201ENST00000263309 ATP6AP2A0A1C7CYW4 349 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 A0A1W2PQ72 361 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 GLOD5A6NK44 160 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 OR6C76A6NM76 312 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 LSM1O15116 133 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 TMPRSS11DO60235 418 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 DIAPH2O60879 1101 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 CNOT3O75175 753 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 SNNO75324 88 aaPredicted RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ATP6AP2O75787 350 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 SOX30O94993 753 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 PRR35P0CG20 571 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 CPMP14384 443 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 MANFP55145 182 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 HNRNPH2P55795 449 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 NRG3P56975 720 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC26A5P58743 744 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 RPP38P78345 283 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ARG2P78540 354 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 UGT3A2Q3SY77 523 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 C6orf136Q5SQH8 315 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 CPTPQ5TA50 214 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 IL23RQ5VWK5 629 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 BHLHB9Q6PI77 547 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 Q6ZSR9 355 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ASB18Q6ZVZ8 466 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 TAGAPQ8N103 731 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 TMEM156Q8N614 296 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 OR7G1Q8NGA0 311 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 TMEM125Q96AQ2 219 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 EXOSC8Q96B26 276 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ERP27Q96DN0 273 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ZBED6CLQ96FA7 236 aaPredicted RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 PPP1R36Q96LQ0 422 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 BBC3Q96PG8 261 aaPredicted RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 CNPPD1Q9BV87 410 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 TRIM55Q9BYV6 548 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 OR8D2Q9GZM6 311 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 NSRP1Q9H0G5 558 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 RABEP2Q9H5N1 569 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 REEP4Q9H6H4 257 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 C3orf14Q9HBI5 128 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC35C2Q9NQQ7 365 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 NECTIN3Q9NQS3 549 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 PNPOQ9NVS9 261 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 HAO1Q9UJM8 370 aa11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 MRTO4Q9UKD2 239 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-201ENST00000263309 ADAMTS20P59510 1910 aa11.74□□□□□ -0.53
CLNS1A-201ENST00000263309 FURINP09958 794 aa11.74□□□□□ -0.53
CLNS1A-201ENST00000263309 IDO1P14902 403 aa11.74□□□□□ -0.53
CLNS1A-201ENST00000263309 WT1P19544 449 aaPredicted RBP11.74□□□□□ -0.53
CLNS1A-201ENST00000263309 KRT20P35900 424 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms