RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 ERAL1O75616 437 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 ASGR2P07307 311 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 F3P13726 295 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 GABRG2P18507 467 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 CERS1P27544 350 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 PPP2R1BP30154 601 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 MAGEA8P43361 318 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 HMGA2P52926 109 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 PIGFQ07326 219 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 KIR2DS3Q14952 304 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 DUSP7Q16829 419 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 BHLHB9Q6PI77 547 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 PHF10Q8WUB8 498 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 MUL1Q969V5 352 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 CCNB1IP1Q9NPC3 277 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 ACER3Q9NUN7 267 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 PAK1IP1Q9NWT1 392 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 TRPC4Q9UBN4 977 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 APOBEC3BQ9UH17 382 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 FBXW2Q9UKT8 454 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 ENTPD4Q9Y227 616 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 ATG4BQ9Y4P1 393 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 C2CD4DB7Z1M9 353 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 E9PQ18 207 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 BTN3A3O00478 584 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PGRMC2O15173 223 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PRKRAO75569 313 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SERPINB7O75635 380 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 CCNB2O95067 398 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 MFN2O95140 757 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ATE1O95260 518 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SEMA4FO95754 770 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 AIFM1O95831 613 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 OR12D1P0DN82 309 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ITIH1P19827 911 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 CD247P20963 164 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 MATN1P21941 496 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC19A1P41440 591 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 KHKP50053 298 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 RAB8AP61006 207 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 CSNK2BP67870 215 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 RGS1Q08116 209 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 GANABQ14697 944 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ALG11Q2TAA5 492 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PRRT3Q5FWE3 981 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 GTF2IRD2BQ6EKJ0 949 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 GPR153Q6NV75 609 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 TMEM64Q6YI46 380 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF605Q86T29 641 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 GTF2IRD2Q86UP8 949 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SFXN5Q8TD22 340 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 RAB2BQ8WUD1 216 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 HMGB4Q8WW32 186 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 GAL3ST3Q96A11 431 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 MOAP1Q96BY2 351 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PSD2Q9BQI7 771 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 NAA50Q9GZZ1 169 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 OR51I1Q9H343 314 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 DUSP21Q9H596 190 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 KCNK12Q9HB15 430 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 GIMAP4Q9NUV9 329 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 TRNAU1APQ9NX07 287 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 LYARQ9NX58 379 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ENOPH1Q9UHY7 261 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PCDHGB1Q9Y5G3 927 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 HS3ST3A1Q9Y663 406 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 LRP4O75096 1905 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 A6NCN8 305 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 TOR1BO14657 336 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 MRPS14O60783 128 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 FAM20BO75063 409 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 NR2F1P10589 423 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 GLULP15104 373 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PCMT1P22061 227 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 LIMS1P48059 325 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PXNP49023 591 aaPredicted RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC35A2P78381 396 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ILF3Q12906 894 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC48A1Q6P1K1 146 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 Q6ZSR6 202 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ASPGQ86U10 573 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 KRT73Q86Y46 540 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 TRIM48Q8IWZ4 208 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 TDHQ8IZJ6 230 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 TAGAPQ8N103 731 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF540Q8NDQ6 660 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 APOBEC4Q8WW27 367 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 XAGE5Q8WWM1 108 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 DCUN1D5Q9BTE7 237 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SERHL2Q9H4I8 314 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 RASSF1Q9NS23 344 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 ERVK-18Q9QC07 812 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 AASSQ9UDR5 926 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 SEC14L3Q9UDX4 400 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 WARS2Q9UGM6 360 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 HCN4Q9Y3Q4 1203 aa12.23□□□□□ -0.45
SPTLC1-201ENST00000262554 PCDHGA6Q9Y5G7 932 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms