RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ISL1P61371 349 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CPSF6Q16630 551 aaKnown RBP eCLIP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 APLFQ8IW19 511 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 NT5CQ8TCD5 201 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 NCLNQ969V3 563 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CMTM5Q96DZ9 223 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF764Q96H86 408 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 COPS8Q99627 209 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 NDRG2Q9UN36 371 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 TIMM44O43615 452 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 FOXD2O60548 495 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SNRPBP14678 240 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 IGFBP4P22692 258 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CRABP2P29373 138 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 INPP1P49441 399 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 RUNX1T1Q06455 604 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CDC16Q13042 620 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 INSL4Q14641 139 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 TTC31Q49AM3 519 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ATAT1Q5SQI0 421 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 KIAA0895LQ68EN5 471 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ARMC6Q6NXE6 501 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 B3GNT6Q6ZMB0 384 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM181AQ8N9Y4 354 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CADM4Q8NFZ8 388 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 RPS4Y2Q8TD47 263 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SMAP2Q8WU79 429 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 RIT1Q92963 219 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ACAT2Q9BWD1 397 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 FGF23Q9GZV9 251 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 NEK6Q9HC98 313 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SATB2Q9UPW6 733 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SH3BP1Q9Y3L3 701 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 LRRN3E7EW58 273 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SOCS6O14544 535 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC9A3R1O14745 358 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ALOX12BO75342 701 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SEMA4FO95754 770 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SERPINA4P29622 427 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 GPC1P35052 558 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ESRRGP62508 458 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 HOXC5Q00444 222 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SIGLEC14Q08ET2 396 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TSTA3Q13630 321 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MMEL1Q495T6 779 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 FNDC3BQ53EP0 1204 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 C1orf210Q8IVY1 113 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TTC16Q8NEE8 873 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 OR2T34Q8NGX1 318 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 POC1BQ8TC44 478 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 C16orf78Q8WTQ4 265 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TFGQ92734 400 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TREX2Q9BQ50 279 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TACO1Q9BSH4 297 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 FSD1LQ9BXM9 530 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 REXO4Q9GZR2 422 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 LRRN3Q9H3W5 708 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MAT2BQ9NZL9 334 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 EGFL7Q9UHF1 273 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ANKHD1Q8IWZ3 2542 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A0G2JND7 137 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 PEX12O00623 359 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 AZIN1O14977 448 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 RPN2P04844 631 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 KRT8P05787 483 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 GSNP06396 782 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ITIH1P19827 911 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 CNTFP26441 200 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SPRP35270 261 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 PNLIPRP1P54315 467 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TYW3Q6IPR3 259 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 FAHD1Q6P587 224 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 CCDC80Q76M96 950 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 RYBPQ8N488 228 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TEX9Q8N6V9 391 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 OR8K5Q8NH50 307 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MAGEC3Q8TD91 643 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 CCDC126Q96EE4 140 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 POLE3Q9NRF9 147 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF451Q9Y4E5 1061 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ENTPD2Q9Y5L3 495 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MRPS18BQ9Y676 258 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TMEM114B3SHH9 223 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 EIF3FO00303 357 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 DNAJB5O75953 348 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 NFATC1O95644 943 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 SAT1P21673 171 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 HSD3B2P26439 372 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 RGS4P49798 205 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 HGFACQ04756 655 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF235Q14590 738 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 TTLL9Q3SXZ7 439 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM174BQ3ZCQ3 159 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 CDKL4Q5MAI5 379 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 LCN8Q6JVE9 175 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 MYPOPQ86VE0 399 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 OR4N5Q8IXE1 308 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 CA13Q8N1Q1 262 aa5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM120BQ96EK7 910 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-201ENST00000260810 DACH2Q96NX9 599 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms