RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 UFD1Q92890 307 aa13.72□□□□□ -0.21
FGFR3-201ENST00000260795 IL21RQ9HBE5 538 aa13.72□□□□□ -0.21
FGFR3-201ENST00000260795 MCUBQ9NWR8 336 aa13.72□□□□□ -0.21
FGFR3-201ENST00000260795 CLCA3PQ9Y6N3 262 aa13.72□□□□□ -0.21
FGFR3-201ENST00000260795 CTDSP2O14595 271 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 PCDH17O14917 1159 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 TSPAN12O95859 305 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 MYL9P24844 172 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 CSTF1Q05048 431 aaKnown RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 FAAH2Q6GMR7 532 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 TMEM53Q6P2H8 277 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 RGMAQ96B86 450 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 RBM18Q96H35 190 aaKnown RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 PHOX2BQ99453 314 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 FAM170BA6NMN3 283 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 RHPN2P1A8MT19 583 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 RNGTTO60942 597 aaKnown RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 SDC3O75056 442 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 DNAJB5O75953 348 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 MPC1LP0DKB6 136 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 IFI30P13284 250 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ACPPP15309 386 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 SOX3P41225 446 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ADPRMQ3LIE5 342 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 LCN1P1Q5VSP4 162 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 NEK10Q6ZWH5 1172 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 TRAM1L1Q8N609 369 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 FBXO15Q8NCQ5 510 aaPredicted RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 DNAJA3Q96EY1 480 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 TMEM19Q96HH6 336 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 PDFQ9HBH1 243 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ING3Q9NXR8 418 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 MRPL39Q9NYK5 338 aaKnown RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 TCRBV5S2A0A599 114 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 FAM227AF5H4B4 570 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 BMP4P12644 408 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 PCSK2P16519 638 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 AK4P27144 223 aaPredicted RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 IDUAP35475 653 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 NKG7Q16617 165 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 SLC5A12Q1EHB4 618 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ARL9Q6T311 187 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 OR4N5Q8IXE1 308 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 LRRC17Q8N6Y2 441 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 MINDY2Q8NBR6 621 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 FAM98AQ8NCA5 519 aaKnown RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ATP6V1C2Q8NEY4 427 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 TMEM80Q96HE8 168 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ZNF300Q96RE9 604 aaPredicted RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 RBM38Q9H0Z9 239 aaKnown RBP13.71□□□□□ -0.21
FGFR3-201ENST00000260795 MKLN1Q9UL63 735 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 PCDHGA10Q9Y5H3 936 aa13.71□□□□□ -0.21
FGFR3-201ENST00000260795 ATAD5Q96QE3 1844 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.71□□□□□ -0.22
FGFR3-201ENST00000260795 ANHXE9PGG2 379 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 KMOO15229 486 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 B4GALT2O60909 372 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 SCN2BO60939 215 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 SLC2A2P11168 524 aaPredicted RBP13.71□□□□□ -0.22
FGFR3-201ENST00000260795 DHPSP49366 369 aaPredicted RBP13.71□□□□□ -0.22
FGFR3-201ENST00000260795 ISL1P61371 349 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 ZNHIT3Q15649 155 aaPredicted RBP13.71□□□□□ -0.22
FGFR3-201ENST00000260795 UGT8Q16880 541 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 FAM92BQ6ZTR7 304 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.222e-6■■■■□ 19.5
FGFR3-201ENST00000260795 RBM12BQ8IXT5 1001 aaKnown RBP13.71□□□□□ -0.22
FGFR3-201ENST00000260795 SIX5Q8N196 739 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 CDH7Q9ULB5 785 aa13.71□□□□□ -0.22
FGFR3-201ENST00000260795 CR2P20023 1033 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 MAOBP27338 520 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 HNRNPA1L2Q32P51 320 aaKnown RBP13.7□□□□□ -0.22
FGFR3-201ENST00000260795 ADNP2Q6IQ32 1131 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 SYCE2Q6PIF2 218 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 CYHR1Q6ZMK1 362 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 SERPINA11Q86U17 422 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 C16orf78Q8WTQ4 265 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 LRR1Q96L50 414 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 WACQ9BTA9 647 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 GPN2Q9H9Y4 310 aaPredicted RBP13.7□□□□□ -0.22
FGFR3-201ENST00000260795 PAK6Q9NQU5 681 aaPredicted RBP13.7□□□□□ -0.22
FGFR3-201ENST00000260795 SLC6A13Q9NSD5 602 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 HSFX1Q9UBD0 423 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 PPT2Q9UMR5 302 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 GRXCR2A6NFK2 248 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 M0R3H8 397 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 FRS3O43559 492 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
FGFR3-201ENST00000260795 SEC14L2O76054 403 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 KCNK5O95279 499 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 ITGB8P26012 769 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 GJA4P35212 333 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 CDH11P55287 796 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 PTGES3Q15185 160 aaKnown RBP13.7□□□□□ -0.22
FGFR3-201ENST00000260795 USP53Q70EK8 1073 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 Q8N9G6 341 aaPredicted RBP13.7□□□□□ -0.22
FGFR3-201ENST00000260795 B3GNT7Q8NFL0 401 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 DPH7Q9BTV6 452 aa13.7□□□□□ -0.22
FGFR3-201ENST00000260795 CLEC4MQ9H2X3 399 aaPredicted RBP13.7□□□□□ -0.22
FGFR3-201ENST00000260795 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms