RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 C6orf203Q9P0P8 240 aaPredicted RBP16.48■□□□□ 0.23
SRSF1-201ENST00000258962 TMEM9Q9P0T7 183 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 PDP2Q9P2J9 529 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 KLHL3Q9UH77 587 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 RIMS3Q9UJD0 308 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 WASHC1A8K0Z3 465 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 PDPK1O15530 556 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 KIF1CO43896 1103 aaKnown RBP16.47■□□□□ 0.23
SRSF1-201ENST00000258962 DXOO77932 396 aaKnown RBP16.47■□□□□ 0.23
SRSF1-201ENST00000258962 AIFM1O95831 613 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 MLLT3P42568 568 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-201ENST00000258962 GFERP55789 205 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 DEFB110Q30KQ9 67 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 IRAK1BP1Q5VVH5 260 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 C18orf63Q68DL7 685 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 FAM92BQ6ZTR7 304 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 SERPINA11Q86U17 422 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 NATD1Q8N6N6 113 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 KLHL6Q8WZ60 621 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 FGF11Q92914 225 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 REXO5Q96IC2 774 aaKnown RBP16.47■□□□□ 0.23
SRSF1-201ENST00000258962 ZNF578Q96N58 590 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-201ENST00000258962 MAPKAP1Q9BPZ7 522 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 FAIM2Q9BWQ8 316 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 RAB33BQ9H082 229 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 CHST8Q9H2A9 424 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 C1GALT1Q9NS00 363 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 LYARQ9NX58 379 aaKnown RBP16.47■□□□□ 0.23
SRSF1-201ENST00000258962 PISDQ9UG56 409 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 FBXW2Q9UKT8 454 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 ZMIZ1Q9ULJ6 1067 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 PCDHGB4Q9UN71 923 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 LRRC42Q9Y546 428 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 AP4S1Q9Y587 144 aa16.47■□□□□ 0.23
SRSF1-201ENST00000258962 MAP1BP46821 2468 aaKnown RBP16.47■□□□□ 0.23
SRSF1-201ENST00000258962 A0A1W2PNU3 283 aaPredicted RBP16.46■□□□□ 0.23
SRSF1-201ENST00000258962 DHRS12A0PJE2 317 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 URADA6NGE7 173 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 EIF2S1P05198 315 aaKnown RBP16.46■□□□□ 0.23
SRSF1-201ENST00000258962 CTSBP07858 339 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 IL1RNP18510 177 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 MVDP53602 400 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 POLE2P56282 527 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 VSX2P58304 361 aaPredicted RBP16.46■□□□□ 0.23
SRSF1-201ENST00000258962 C16orf72Q14CZ0 275 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 TBC1D25Q3MII6 688 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 SWT1Q5T5J6 900 aaKnown RBP16.46■□□□□ 0.23
SRSF1-201ENST00000258962 TMEM214Q6NUQ4 689 aaKnown RBP16.46■□□□□ 0.23
SRSF1-201ENST00000258962 IGF2-ASQ6U949 168 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 ZZZ3Q8IYH5 903 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 DNAJC22Q8N4W6 341 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 CSNK1A1LQ8N752 337 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 TNIP2Q8NFZ5 429 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 OR5P2Q8WZ92 322 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 NSMCE2Q96MF7 247 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 TGM7Q96PF1 710 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 SERINC2Q96SA4 455 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 PKP2Q99959 881 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 SLC35A5Q9BS91 424 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 CXorf36Q9H7Y0 433 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 CCM2LQ9NUG4 571 aaPredicted RBP16.46■□□□□ 0.23
SRSF1-201ENST00000258962 GPATCH2Q9NW75 528 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 EPHA6Q9UF33 1036 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 ACSL6Q9UKU0 697 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 APC2O95996 2303 aa16.46■□□□□ 0.23
SRSF1-201ENST00000258962 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.23
SRSF1-201ENST00000258962 GLOD5A6NK44 160 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CXCR6O00574 342 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CASQ2O14958 399 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 PGRMC2O15173 223 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 GSTA4O15217 222 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ZSCAN9O15535 394 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 PROM1O43490 865 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 DNAJB6O75190 326 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 GUCY1B2O75343 617 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 C9P02748 559 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 DDX5P17844 614 aaKnown RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 PPIBP23284 216 aaKnown RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CYP51A1Q16850 503 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 DEFB134Q4QY38 66 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CMPK2Q5EBM0 449 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 MANEAQ5SRI9 462 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 TMEM164Q5U3C3 297 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CPZQ66K79 652 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ABHD13Q7L211 337 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 PRSS41Q7RTY9 318 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 PTOV1Q86YD1 416 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ARHGEF39Q8N4T4 335 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CATSPER1Q8NEC5 780 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 FIG4Q92562 907 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ROGDIQ9GZN7 287 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 EPS8L2Q9H6S3 715 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 GORASP2Q9H8Y8 452 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 STARD5Q9NSY2 213 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ARMC1Q9NVT9 282 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 KCMF1Q9P0J7 381 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CES1P1Q9UKY3 287 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 URB1O60287 2271 aaKnown RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ADAMTS20P59510 1910 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 PMS2P1A4D2B8 440 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms