RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 MYRFLQ96LU7 910 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 LINC00052Q96N35 136 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OR5B12Q96R08 314 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PIMREGQ9BSJ6 248 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PARD6GQ9BYG4 376 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 TCEAL2Q9H3H9 227 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 DOT1LQ8TEK3 1739 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR37O15354 613 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SIX6O95475 246 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TSPAN12O95859 305 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 NDUFB7P17568 137 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SPI1P17947 270 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TUBG1P23258 451 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 AHRP35869 848 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ADGRG5Q8IZF4 528 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 OR6J1Q8NGC5 347 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 OR2G2Q8NGZ5 317 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 KIAA1191Q96A73 305 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PKMYT1Q99640 499 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 NFKBIZQ9BYH8 718 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 MAGEB5Q9BZ81 275 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PCDHAC1Q9H158 963 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TSPAN10Q9H1Z9 355 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF385DQ9H6B1 395 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CCL15-CCL14A0A0B4J2E2 113 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 KDELR3O43731 214 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 NOBOXO60393 691 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SEC14L2O76054 403 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TSPAN15O95858 294 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TYRP14679 529 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 HOXC12P31275 282 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 THBS4P35443 961 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ARL4AP40617 200 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 RPL29P47914 159 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 KCNJ3P48549 501 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SEMA3BQ13214 749 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 GRB7Q14451 532 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CCL15Q16663 113 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF630Q2M218 657 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 OR10K2Q6IF99 312 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 GALNT5Q7Z7M9 940 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TCEANCQ8N8B7 351 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 DNERQ8NFT8 737 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SPATA20Q8TB22 786 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM117Q9H0C3 514 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC25A32Q9H2D1 315 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 BTNL2Q9UIR0 455 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 LGALS8O00214 317 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 KIAA0513O60268 411 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 HPRP00739 348 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CST2P09228 141 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 LINC00614P0C842 121 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 RAP2AP10114 183 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PF4V1P10720 104 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SOAT1P35610 550 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 REP15Q6BDI9 236 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ZC3H14Q6PJT7 736 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 VHLLQ6RSH7 139 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SCIMPQ6UWF3 145 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 WDR88Q6ZMY6 472 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 GAREM2Q75VX8 874 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PRSS48Q7RTY5 328 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 MAP4K3Q8IVH8 894 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ANKRD52Q8NB46 1076 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM84AQ96KN4 292 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 DMRTA2Q96SC8 542 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 C11orf70Q9BRQ4 267 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PINK1Q9BXM7 581 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SRRQ9GZT4 340 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ADAM7Q9H2U9 754 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PXMP2Q9NR77 195 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SALL4Q9UJQ4 1053 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 DNPEPQ9ULA0 475 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM218A2RU14 115 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 KHNYNO15037 678 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 LDLRAD4O15165 306 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CD48P09326 243 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 SPP1P10451 314 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PRPS1L1P21108 318 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 YWHAQP27348 245 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 HSPA7P48741 367 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CLCN7P51798 805 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 AKR1C2P52895 323 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 RAP2BP61225 183 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TSTQ16762 297 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF699Q32M78 642 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 EFHC2Q5JST6 749 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ZDHHC24Q6UX98 284 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 USP50Q70EL3 339 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ABHD12BQ7Z5M8 362 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 HSD17B13Q7Z5P4 300 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 MAML2Q8IZL2 1156 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CNOT9Q92600 299 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 EBF4Q9BQW3 602 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 KCNJ16Q9NPI9 418 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 OLAHQ9NV23 265 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM120CQ9NX05 1096 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 C5P01031 1676 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms