RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ZNF33AQ06730 810 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CLN3Q13286 438 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 GBX1Q14549 363 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 REC114Q7Z4M0 266 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 TAC4Q86UU9 113 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SLC22A9Q8IVM8 553 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 TMEM132CQ8N3T6 1108 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF655Q8N720 491 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 B3GALNT2Q8NCR0 500 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 USP7Q93009 1102 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SLC25A36Q96CQ1 311 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SCMH1Q96GD3 660 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CELF6Q96J87 481 aaKnown RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 NECAB3Q96P71 396 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ERVK-6Q9BXR3 956 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 RBCK1Q9BYM8 510 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SLC29A3Q9BZD2 475 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 OR51E2Q9H255 320 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF768Q9H5H4 540 aaKnown RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 TCF7L1Q9HCS4 588 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CHMP1AQ9HD42 196 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF358Q9NW07 568 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 HCFC1R1Q9NWW0 138 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 OAS3Q9Y6K5 1087 aaKnown RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 MEIKINA0A087WXM9 373 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SLC12A8A0AV02 714 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 E9PQ18 207 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 NR5A2O00482 541 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 GNGT2O14610 69 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 EEDO75530 441 aaKnown RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 GADD45GO95257 159 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 IFNA2P01563 188 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 TSPAN19P0C672 248 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 HAPLN1P10915 354 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 HDCP19113 662 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 DNASE1P24855 282 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CYP2F1P24903 491 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 PAX6P26367 422 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ETV5P41161 510 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CD81P60033 236 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 NTHL1P78549 312 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ZP2Q05996 745 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CAMK2DQ13557 499 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 OPCMLQ14982 345 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 FCN2Q15485 313 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 C21orf62-AS1Q17RA5 79 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 KRBOX4Q5JUW0 171 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 HACD4Q5VWC8 232 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 RPL13AP3Q6NVV1 102 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 HAGHLQ6PII5 290 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ETV3LQ6ZN32 361 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 KCTD6Q8NC69 237 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 AKR7LQ8NHP1 331 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 UPRTQ96BW1 309 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CERS2Q96G23 380 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 PCED1BQ96HM7 432 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 FUBP3Q96I24 572 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 KCNJ15Q99712 375 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CHCHD6Q9BRQ6 235 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CRLF2Q9HC73 371 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 GALNT9Q9HCQ5 603 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 DUSP22Q9NRW4 184 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SAE1Q9UBE0 346 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 SEC14L3Q9UDX4 400 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 LEF1Q9UJU2 399 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ASB1Q9Y576 335 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ANAPC1Q9H1A4 1944 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 A0A1B0GV90 55 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 OR6C74A6NCV1 312 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 MCIDASD6RGH6 385 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 TEX46H3BTG2 121 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 LCMT2O60294 686 aaKnown RBP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 PRAMEF1O95521 474 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 CFDP00746 253 aaPredicted RBP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 SERPINA1P01009 418 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 HMBSP08397 361 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 ERVK-10P10266 1014 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 PEPDP12955 493 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 GGT1P19440 569 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 XPAP23025 273 aaPredicted RBP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 ITGB7P26010 798 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 MMP12P39900 470 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 EPHB3P54753 998 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 HNRNPKP61978 463 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 RPL7AP62424 266 aaKnown RBP11.28□□□□□ -0.6
CCNA1-201ENST00000255465 CUL2Q13617 745 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 NFYCQ13952 458 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 PYDC2Q56P42 97 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 DDI2Q5TDH0 399 aa11.28□□□□□ -0.6
CCNA1-201ENST00000255465 IL31Q6EBC2 164 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms