RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ITGB1BP2Q9UKP3 347 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 KCNS2Q9ULS6 477 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 A0A096LPI6 279 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 UNC119BA6NIH7 251 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 LAMTOR5O43504 91 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 ABCB7O75027 752 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 HTR6P50406 440 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 RAB12Q6IQ22 244 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 LINC00471Q8N535 108 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC6A7Q99884 636 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 DOHHQ9BU89 302 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 STRADBQ9C0K7 418 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC10A3P09131 477 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ARSAP15289 507 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 FNTBP49356 437 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 SH3BP2P78314 561 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 VMACQ2NL98 169 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF404Q494X3 552 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 OR4C11Q6IEV9 310 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 HERPUD2Q9BSE4 406 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ATG5Q9H1Y0 275 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 MYEF2Q9P2K5 600 aaKnown RBP17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ADAMTS6Q9UKP5 1117 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 JUPP14923 745 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 SEC23BQ15437 767 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 DUS1LQ6P1R4 473 aaKnown RBP17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 MEX3DQ86XN8 651 aaKnown RBP17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 THAP6Q8TBB0 222 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 DZANK1Q9NVP4 752 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 GPR52Q9Y2T5 361 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 DUX1O43812 170 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 SPINT3P49223 89 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 HHEXQ03014 270 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ECH1Q13011 328 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF689Q96CS4 500 aaPredicted RBP17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 CIB4A0PJX0 185 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 BHMG1C9JSJ3 638 aaPredicted RBP17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 EMC8O43402 210 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF252P-AS1Q0IIN9 211 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 FBXO43Q4G163 708 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF471Q9BX82 626 aaPredicted RBP17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ASB6Q9NWX5 421 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 HCSTQ9UBK5 93 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 SPO11Q9Y5K1 396 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 E2F3O00716 465 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 FLRT2O43155 660 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 GCGRP47871 477 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 HERV-K104P61576 105 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF550Q7Z398 422 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 BBS10Q8TAM1 723 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 EXTL2Q9UBQ6 330 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 PRODH2Q9UF12 536 aa17.87■□□□□ 0.45
SMARCC1-201ENST00000254480 FAM171A2A8MVW0 826 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 C22orf42Q6IC83 251 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC27A4Q6P1M0 643 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF773Q6PK81 442 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 OR5J2Q8NH18 312 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 PIP5K1AQ99755 562 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 AIFM2Q9BRQ8 373 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 SIGLEC1Q9BZZ2 1709 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 M0R036 132 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 PLCZ1Q86YW0 608 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 FAM46AQ96IP4 442 aaKnown RBP17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 CLEC4EQ9ULY5 219 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 MPC1LP0DKB6 136 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 PRKCAP17252 672 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 VEGFBP49765 207 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 CLDN2P57739 230 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 ZMYND11Q15326 602 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 CEACAM19Q7Z692 300 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 ZC3H3Q8IXZ2 948 aaKnown RBP17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 OR2T33Q8NG76 320 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 OR5AR1Q8NGP9 310 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 STRA6Q9BX79 667 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 TMEM185BQ9H7F4 350 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 VRTNQ9H8Y1 702 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 ALG5Q9Y673 324 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 OR52A4PA6NMU1 304 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 ADRB3P13945 408 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 PSMA6P60900 246 aaKnown RBP17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 NSDHLQ15738 373 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF783Q6ZMS7 281 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 KLBQ86Z14 1044 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 NEIL3Q8TAT5 605 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 THAP4Q8WY91 577 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 CIDECQ96AQ7 238 aaPredicted RBP17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 APIPQ96GX9 242 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC25A44Q96H78 314 aaPredicted RBP17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 SMIM14Q96QK8 99 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC17A9Q9BYT1 436 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 ABCD2Q9UBJ2 740 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 POU2F3Q9UKI9 436 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 MYH11P35749 1972 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 SORBS2O94875 1100 aaKnown RBP17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 STSP08842 583 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 S1PR1P21453 382 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 HK3P52790 923 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 TAS1R1Q7RTX1 841 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 PRR22Q8IZ63 422 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms