RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CCNYL2Q5T2Q4 361 aa21.32■■□□□ 1
LSM4-201ENST00000252816 PAGE2Q7Z2X7 111 aa21.32■■□□□ 1
LSM4-201ENST00000252816 ST13P4Q8IZP2 240 aaPredicted RBP21.32■■□□□ 1
LSM4-201ENST00000252816 TMEM156Q8N614 296 aa21.32■■□□□ 1
LSM4-201ENST00000252816 METTL6Q8TCB7 284 aa21.32■■□□□ 1
LSM4-201ENST00000252816 CCDC126Q96EE4 140 aa21.32■■□□□ 1
LSM4-201ENST00000252816 KCNA7Q96RP8 456 aa21.32■■□□□ 1
LSM4-201ENST00000252816 WDR41Q9HAD4 459 aa21.32■■□□□ 1
LSM4-201ENST00000252816 YARS2Q9Y2Z4 477 aaKnown RBP21.32■■□□□ 1
LSM4-201ENST00000252816 ASPDHA6ND91 283 aa21.31■■□□□ 1
LSM4-201ENST00000252816 WWP2O00308 870 aa21.31■■□□□ 1
LSM4-201ENST00000252816 NME2P1O60361 137 aa21.31■■□□□ 1
LSM4-201ENST00000252816 ESRRBO95718 433 aa21.31■■□□□ 1
LSM4-201ENST00000252816 IGKV3-11P04433 115 aa21.31■■□□□ 1
LSM4-201ENST00000252816 NME2P22392 152 aa21.31■■□□□ 1
LSM4-201ENST00000252816 SSR4P51571 173 aa21.31■■□□□ 1
LSM4-201ENST00000252816 HK2P52789 917 aa21.31■■□□□ 1
LSM4-201ENST00000252816 NAGLUP54802 743 aa21.31■■□□□ 1
LSM4-201ENST00000252816 PKNOX1P55347 436 aa21.31■■□□□ 1
LSM4-201ENST00000252816 RNF4P78317 190 aa21.31■■□□□ 1
LSM4-201ENST00000252816 NDUFAF5Q5TEU4 345 aa21.31■■□□□ 1
LSM4-201ENST00000252816 OR52E8Q6IFG1 317 aa21.31■■□□□ 1
LSM4-201ENST00000252816 EMBQ6PCB8 327 aa21.31■■□□□ 1
LSM4-201ENST00000252816 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.31■■□□□ 1
LSM4-201ENST00000252816 OR8K3Q8NH51 312 aa21.31■■□□□ 1
LSM4-201ENST00000252816 AGAP11Q8TF27 550 aa21.31■■□□□ 1
LSM4-201ENST00000252816 CAVIN3Q969G5 261 aa21.31■■□□□ 1
LSM4-201ENST00000252816 FRMD6Q96NE9 622 aa21.31■■□□□ 1
LSM4-201ENST00000252816 PSMG3-AS1Q96PY0 264 aa21.31■■□□□ 1
LSM4-201ENST00000252816 VPS29Q9UBQ0 182 aa21.31■■□□□ 1
LSM4-201ENST00000252816 OSGIN2Q9Y236 505 aa21.31■■□□□ 1
LSM4-201ENST00000252816 STK38LQ9Y2H1 464 aa21.31■■□□□ 1
LSM4-201ENST00000252816 TIMM22Q9Y584 194 aa21.31■■□□□ 1
LSM4-201ENST00000252816 ULK1O75385 1050 aa21.3■■□□□ 1
LSM4-201ENST00000252816 ENO1P06733 434 aaKnown RBP21.3■■□□□ 1
LSM4-201ENST00000252816 HSD3B1P14060 373 aa21.3■■□□□ 1
LSM4-201ENST00000252816 HSD3B2P26439 372 aa21.3■■□□□ 1
LSM4-201ENST00000252816 HMOX2P30519 316 aa21.3■■□□□ 1
LSM4-201ENST00000252816 MAPK12P53778 367 aa21.3■■□□□ 1
LSM4-201ENST00000252816 ERCC6LQ2NKX8 1250 aa21.3■■□□□ 1
LSM4-201ENST00000252816 MDGA2Q7Z553 956 aa21.3■■□□□ 1
LSM4-201ENST00000252816 MMP21Q8N119 569 aa21.3■■□□□ 1
LSM4-201ENST00000252816 CYP4Z2PQ8N1L4 340 aa21.3■■□□□ 1
LSM4-201ENST00000252816 C1orf52Q8N6N3 182 aaKnown RBP21.3■■□□□ 1
LSM4-201ENST00000252816 RDH11Q8TC12 318 aa21.3■■□□□ 1
LSM4-201ENST00000252816 SSC4DQ8WTU2 575 aa21.3■■□□□ 1
LSM4-201ENST00000252816 FBXL20Q96IG2 436 aa21.3■■□□□ 1
LSM4-201ENST00000252816 RASL10BQ96S79 203 aa21.3■■□□□ 1
LSM4-201ENST00000252816 ACPTQ9BZG2 426 aa21.3■■□□□ 1
LSM4-201ENST00000252816 MID1IP1Q9NPA3 183 aa21.3■■□□□ 1
LSM4-201ENST00000252816 COPS7AQ9UBW8 275 aa21.3■■□□□ 1
LSM4-201ENST00000252816 OR10H2O60403 315 aa21.29■■□□□ 1
LSM4-201ENST00000252816 ZNF354AO60765 605 aaPredicted RBP21.29■■□□□ 1
LSM4-201ENST00000252816 OR6B1O95007 311 aa21.29■■□□□ 1
LSM4-201ENST00000252816 SLC35E2P0CK97 266 aa21.29■■□□□ 1
LSM4-201ENST00000252816 CPA3P15088 417 aa21.29■■□□□ 1
LSM4-201ENST00000252816 FOXA1P55317 472 aa21.29■■□□□ 1
LSM4-201ENST00000252816 DNAJB13P59910 316 aa21.29■■□□□ 1
LSM4-201ENST00000252816 ERVK-8P63133 956 aa21.29■■□□□ 1
LSM4-201ENST00000252816 CSTF3Q12996 717 aaKnown RBP21.29■■□□□ 1
LSM4-201ENST00000252816 SPRED3Q2MJR0 410 aa21.29■■□□□ 1
LSM4-201ENST00000252816 GFRALQ6UXV0 394 aa21.29■■□□□ 1
LSM4-201ENST00000252816 FRMD7Q6ZUT3 714 aa21.29■■□□□ 1
LSM4-201ENST00000252816 TRABD2AQ86V40 505 aa21.29■■□□□ 1
LSM4-201ENST00000252816 C9orf40Q8IXQ3 194 aa21.29■■□□□ 1
LSM4-201ENST00000252816 RIBC1Q8N443 379 aaPredicted RBP21.29■■□□□ 1
LSM4-201ENST00000252816 CCDC63Q8NA47 563 aa21.29■■□□□ 1
LSM4-201ENST00000252816 CHTF18Q8WVB6 975 aa21.29■■□□□ 1
LSM4-201ENST00000252816 RIT1Q92963 219 aa21.29■■□□□ 1
LSM4-201ENST00000252816 TMEM125Q96AQ2 219 aa21.29■■□□□ 1
LSM4-201ENST00000252816 TM4SF18Q96CE8 201 aa21.29■■□□□ 1
LSM4-201ENST00000252816 PELOQ9BRX2 385 aaKnown RBP21.29■■□□□ 1
LSM4-201ENST00000252816 CNPPD1Q9BV87 410 aa21.29■■□□□ 1
LSM4-201ENST00000252816 OXSMQ9NWU1 459 aa21.29■■□□□ 1
LSM4-201ENST00000252816 NMRK1Q9NWW6 199 aa21.29■■□□□ 1
LSM4-201ENST00000252816 LGALS13Q9UHV8 139 aa21.29■■□□□ 1
LSM4-201ENST00000252816 ERVK-19Q9WJR5 959 aa21.29■■□□□ 1
LSM4-201ENST00000252816 SLC5A6Q9Y289 635 aa21.29■■□□□ 1
LSM4-201ENST00000252816 PCDHA9Q9Y5H5 950 aa21.29■■□□□ 1
LSM4-201ENST00000252816 SPTBN1Q01082 2364 aaKnown RBP21.29■■□□□ 1
LSM4-201ENST00000252816 DYRK3O43781 588 aa21.28■■□□□ 1
LSM4-201ENST00000252816 UNC5CO95185 931 aa21.28■■□□□ 1
LSM4-201ENST00000252816 SOX3P41225 446 aa21.28■■□□□ 1
LSM4-201ENST00000252816 HMGCS1Q01581 520 aa21.28■■□□□ 1
LSM4-201ENST00000252816 ZNF267Q14586 743 aaPredicted RBP21.28■■□□□ 1
LSM4-201ENST00000252816 ZNF750Q32MQ0 723 aa21.28■■□□□ 1
LSM4-201ENST00000252816 RNFT1Q5M7Z0 435 aa21.28■■□□□ 1
LSM4-201ENST00000252816 SCIMPQ6UWF3 145 aa21.28■■□□□ 1
LSM4-201ENST00000252816 CPSF7Q8N684 471 aaKnown RBP21.28■■□□□ 1
LSM4-201ENST00000252816 ASB15Q8WXK1 588 aa21.28■■□□□ 1
LSM4-201ENST00000252816 PARD6BQ9BYG5 372 aa21.28■■□□□ 1
LSM4-201ENST00000252816 TSPAN10Q9H1Z9 355 aaPredicted RBP21.28■■□□□ 1
LSM4-201ENST00000252816 TNFRSF12AQ9NP84 129 aa21.28■■□□□ 1
LSM4-201ENST00000252816 SEC14L3Q9UDX4 400 aa21.28■■□□□ 1
LSM4-201ENST00000252816 CES1P1Q9UKY3 287 aa21.28■■□□□ 1
LSM4-201ENST00000252816 A8MVJ9 347 aa21.27■■□□□ 1
LSM4-201ENST00000252816 LDLRP01130 860 aa21.27■■□□□ 1
LSM4-201ENST00000252816 CLPSP04118 112 aa21.27■■□□□ 1
LSM4-201ENST00000252816 PIK3R1P27986 724 aa21.27■■□□□ 1
LSM4-201ENST00000252816 GALNSP34059 522 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms