RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CCDC103Q8IW40 242 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 Q8N9G6 341 aaPredicted RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 ABHD11Q8NFV4 315 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 RGMAQ96B86 450 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 TMEM38AQ9H6F2 299 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 POU2F3Q9UKI9 436 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 K7EQS6 105 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 GADD45GO95257 159 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 OR12D1P0DN82 309 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 NAT2P11245 290 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 CD72P21854 359 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 BCL6P41182 706 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 TUBA3CQ13748 450 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 PUM1Q14671 1186 aaKnown RBP eCLIP14.96□□□□□ -0.02
LRFN1-201ENST00000248668 SF3B4Q15427 424 aaKnown RBP eCLIP14.96□□□□□ -0.02
LRFN1-201ENST00000248668 REEP3Q6NUK4 255 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 AQP11Q8NBQ7 271 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 GEMIN6Q8WXD5 167 aaKnown RBP14.96□□□□□ -0.02
LRFN1-201ENST00000248668 RHBGQ9H310 441 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 DUSP21Q9H596 190 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 SYNPO2LQ9H987 977 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 PELI2Q9HAT8 420 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 FGF22Q9HCT0 170 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 WASH6PQ9NQA3 447 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 N6AMT1Q9Y5N5 214 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 COL4A3Q01955 1670 aa14.96□□□□□ -0.02
LRFN1-201ENST00000248668 SCN2AQ99250 2005 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 POM121BA6NF01 834 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 RNGTTO60942 597 aaKnown RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ERGP11308 486 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ZNF12P17014 697 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 RAB28P51157 221 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 NCS1P62166 190 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 DLX2Q07687 328 aaPredicted RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 RBBP4Q09028 425 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ARHGAP19Q14CB8 494 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 SYPL1Q16563 259 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 TRIM16LQ309B1 348 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 NDUFAF5Q5TEU4 345 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ZNF776Q68DI1 518 aaPredicted RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 IKBIPQ70UQ0 350 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 MTERF3Q96E29 417 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 TRPV4Q9HBA0 871 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ACER3Q9NUN7 267 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ENPP5Q9UJA9 477 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 KRBA1A5PL33 1030 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 HAT1O14929 419 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 SLC28A2O43868 658 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 SOX14O95416 240 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 RECKO95980 971 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ADH1BP00325 375 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 TRIM23P36406 574 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 CCT3P49368 545 aaKnown RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 LIM2P55344 173 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 PRDX1Q06830 199 aaKnown RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 KCNJ8Q15842 424 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 MICAQ29983 383 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 TMEM196Q5HYL7 178 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 BTLAQ7Z6A9 289 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ROGDIQ9GZN7 287 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 MRPS30Q9NP92 439 aaKnown RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 SIRT3Q9NTG7 399 aaPredicted RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ACSL5Q9ULC5 683 aa14.95□□□□□ -0.02
LRFN1-201ENST00000248668 MAP1BP46821 2468 aaKnown RBP14.95□□□□□ -0.02
LRFN1-201ENST00000248668 ANHXE9PGG2 379 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 EML2O95834 649 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 IFNW1P05000 195 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 IGFBP1P08833 259 aaPredicted RBP14.94□□□□□ -0.02
LRFN1-201ENST00000248668 FEN1P39748 380 aaKnown RBP14.94□□□□□ -0.02
LRFN1-201ENST00000248668 PCBP3P57721 371 aaKnown RBP14.94□□□□□ -0.02
LRFN1-201ENST00000248668 CTF1Q16619 201 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 RGS21Q2M5E4 152 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 IQCF2Q8IXL9 164 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 CACTIN-AS1Q8N1I8 211 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 OR4E2Q8NGC2 313 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 CCL4L1Q8NHW4 92 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 HRASLS5Q96KN8 279 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 COL21A1Q96P44 957 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 PIP5K1AQ99755 562 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 COPS4Q9BT78 406 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 SERHL2Q9H4I8 314 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 EPS8L2Q9H6S3 715 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 GPR83Q9NYM4 423 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 ITGB1BP2Q9UKP3 347 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 TRBV4-1A0A0J9YWV2 114 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 PGRMC2O15173 223 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 DNTTP04053 509 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 COL9A1P20849 921 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 RPS21P63220 83 aaKnown RBP14.94□□□□□ -0.02
LRFN1-201ENST00000248668 TFF2Q03403 129 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 OR4C11Q6IEV9 310 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 NIPAL1Q6NVV3 410 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 NUDT18Q6ZVK8 323 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 OR4C15Q8NGM1 316 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 OR5P2Q8WZ92 322 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 ZNF566Q969W8 418 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 ZNF556Q9HAH1 456 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 OBP2AQ9NY56 170 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 TAS2R16Q9NYV7 291 aa14.94□□□□□ -0.02
LRFN1-201ENST00000248668 ICKQ9UPZ9 632 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms