RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 FAM78AQ5JUQ0 283 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 PLAG1Q6DJT9 500 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 TCTN3Q6NUS6 607 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 PNCKQ6P2M8 343 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 CYP4Z2PQ8N1L4 340 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 POC5Q8NA72 575 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 VANGL1Q8TAA9 524 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 PPP1R16AQ96I34 528 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 RHBGQ9H310 441 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 CPNE5Q9HCH3 593 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 REV1Q9UBZ9 1251 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 SLC23A2Q9UGH3 650 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 TMCC3Q9ULS5 477 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 DOCK9Q9BZ29 2069 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 TLR4O00206 839 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 ENTPD6O75354 484 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 ADAP00813 363 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 ELAVL4P26378 380 aaKnown RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SLC15A1P46059 708 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SELENBP1Q13228 472 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 HEPACAMQ14CZ8 416 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SPDYE7PQ495Y7 208 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 C6orf120Q7Z4R8 191 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 AKAP14Q86UN6 197 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 ATCAYQ86WG3 371 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 RBM45Q8IUH3 476 aaKnown RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SFTPA1Q8IWL2 248 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 EXOSC8Q96B26 276 aaKnown RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 WFDC6Q9BQY6 131 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 UCK2Q9BZX2 261 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SIRT3Q9NTG7 399 aaPredicted RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 POU2F3Q9UKI9 436 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 UGT2A1Q9Y4X1 527 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SNX11Q9Y5W9 270 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 EDDM13A0A1B0GTR0 161 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 CCRL2O00421 344 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 HMGN4O00479 90 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 ARHGAP33O14559 1287 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 CAPN5O15484 640 aaPredicted RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 OR10H3O60404 316 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SEMA3DO95025 777 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 DLGAP3O95886 979 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 OSMP13725 252 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 ZNF24P17028 368 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 PCBP4P57723 403 aaKnown RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SSX1Q16384 188 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 DCST1Q5T197 706 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 DEF8Q6ZN54 512 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 UBE2Q1Q7Z7E8 422 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 AMZ2Q86W34 360 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 HEATR4Q86WZ0 1026 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 OR4D11Q8NGI4 311 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 AIF1LQ9BQI0 150 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 MIR1-1HGQ9H1L0 117 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 SLC25A19Q9HC21 320 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 NEUROD4Q9HD90 331 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 LHX9Q9NQ69 397 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 TM7SF3Q9NS93 570 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 DEC1Q9P2X7 70 aa13.65□□□□□ -0.22
HIF3A-202ENST00000244303 CAB39Q9Y376 341 aaPredicted RBP13.65□□□□□ -0.22
HIF3A-202ENST00000244303 TRPM6Q9BX84 2022 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 GRXCR1A8MXD5 290 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ANHXE9PGG2 379 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 H7BY64 318 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 NFATC1O95644 943 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ERGP11308 486 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 EN2P19622 333 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-202ENST00000244303 MAGP20916 626 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ELAVL3Q14576 367 aaKnown RBP13.64□□□□□ -0.23
HIF3A-202ENST00000244303 TOR1AIP1Q5JTV8 583 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ERN2Q76MJ5 926 aaKnown RBP13.64□□□□□ -0.23
HIF3A-202ENST00000244303 C7orf61Q8IZ16 206 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 OR5K2Q8NHB8 316 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 UCN3Q969E3 161 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 PRAP1Q96NZ9 151 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 TAPBPLQ9BX59 468 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 PELI2Q9HAT8 420 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 DNAJC27Q9NZQ0 273 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 PEX16Q9Y5Y5 336 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 A8MU76 341 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 H3BN98 237 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 SNPHO15079 494 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 TBX19O60806 448 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 MED26O95402 600 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 PIPP12273 146 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ALOX12P18054 663 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 S100A1P23297 94 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 SOX6P35712 828 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 CNTN1Q12860 1018 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ILKQ13418 452 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 GPM6BQ13491 265 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 TIMM50Q3ZCQ8 353 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 TMEM52BQ4KMG9 183 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 WDR53Q7Z5U6 358 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-202ENST00000244303 MMAAQ8IVH4 418 aaKnown RBP13.64□□□□□ -0.23
HIF3A-202ENST00000244303 CACTIN-AS1Q8N1I8 211 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 CXorf40AQ8TE69 158 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 SMPDL3AQ92484 453 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms