RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZMAT1Q5H9K5 638 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 GOLGA7Q7Z5G4 137 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 MYO19Q96H55 970 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 NOX3Q9HBY0 568 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 SLC6A20Q9NP91 592 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 USP22Q9UPT9 525 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 PIN4Q9Y237 131 aaKnown RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 RUVBL1Q9Y265 456 aaKnown RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 POM121BA6NF01 834 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 RBBP9O75884 186 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CTPS1P17812 591 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 PREPP48147 710 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 KCNC3Q14003 757 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF311Q5JNZ3 666 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 RASGRP3Q8IV61 690 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TMEM145Q8NBT3 493 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 FAM110BQ8TC76 370 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 SORCS1Q8WY21 1168 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 WDR77Q9BQA1 342 aaPredicted RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 SLC25A13Q9UJS0 675 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TNFSF13BQ9Y275 285 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 A0A1W2PRB8 838 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 H3BQ06 376 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ANXA4P09525 319 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ADRA2BP18089 450 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ADH6P28332 368 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 LHX1P48742 406 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SOWAHCQ53LP3 525 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 NOTUMQ6P988 496 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PRSS55Q6UWB4 352 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SERPINA13PQ6UXR4 307 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF783Q6ZMS7 281 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SHFQ7M4L6 423 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 NRROSQ86YC3 692 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 FUNDC1Q8IVP5 155 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PYCR2Q96C36 320 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 OR5M11Q96RB7 305 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF649Q9BS31 505 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PBDC1Q9BVG4 233 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 TMPRSS5Q9H3S3 457 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ELF5Q9UKW6 265 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 TMEM131LA2VDJ0 1609 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 LRP6O75581 1613 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 C13orf42A0A1B0GVH6 325 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 RPS10-NUDT3A0A1W2PQS6 291 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 LRIT2A6NDA9 550 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PIRTP0C851 137 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ACPPP15309 386 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PTAFRP25105 342 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PAX6P26367 422 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 RPL9P32969 192 aaKnown RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 MAGEA3P43357 314 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 RPS10P46783 165 aaKnown RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 DSC1Q08554 894 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 CES4AQ5XG92 561 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 FAM180BQ6P0A1 224 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 RAB42Q8N4Z0 105 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ZFP41Q8N8Y5 198 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 DDOQ99489 341 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 AGO3Q9H9G7 860 aaKnown RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 PTCH2Q9Y6C5 1203 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 MEGF6O75095 1541 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 NUDT19A8MXV4 375 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 F5H5T6 163 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 MT-ND5P03915 603 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 OR1E2P47887 323 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 QSOX2Q6ZRP7 698 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 CEACAM19Q7Z692 300 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 RIMKLAQ8IXN7 391 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 NLGN4XQ8N0W4 816 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 WDTC1Q8N5D0 677 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ACER1Q8TDN7 264 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SFT2D1Q8WV19 159 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 CLP1Q92989 425 aaKnown RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 FIZ1Q96SL8 496 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ADAM2Q99965 735 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 UNKLQ9H9P5 680 aaKnown RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SLC22A11Q9NSA0 550 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 EFCAB7A8K855 629 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SMAD9O15198 467 aaKnown RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 TCAPO15273 167 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SEC14L5O43304 696 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 CD3GP09693 182 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SAGP10523 405 aaPredicted RBP12.33□□□□□ -0.44
VAMP4-201ENST00000236192 MAGEB1P43366 347 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 SKP1P63208 163 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 GINS1Q14691 196 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 KDM4DQ6B0I6 523 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF546Q86UE3 836 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms