RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 NPIPB8E9PQR5 432 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 TMPRSS11DO60235 418 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 PCDH7O60245 1069 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 OR10H2O60403 315 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 SEC22BO75396 215 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 GPR75O95800 540 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 GBAP04062 536 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 CHRNGP07510 517 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 DRD2P14416 443 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 PRPH2P23942 346 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 PIK3R1P27986 724 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 MAPK1P28482 360 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 TPP2P29144 1249 aaPredicted RBP10.55□□□□□ -0.72
SF3B6-201ENST00000233468 SERPINB3P29508 390 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 TIA1P31483 386 aaKnown RBP eCLIP10.55□□□□□ -0.721e-10■■■■□ 23.9
SF3B6-201ENST00000233468 SLC1A6P48664 564 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 HTR6P50406 440 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 MLLT10P55197 1068 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 HNRNPH2P55795 449 aaKnown RBP10.55□□□□□ -0.72
SF3B6-201ENST00000233468 SLC26A5P58743 744 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 HMGCS1Q01581 520 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 BTKQ06187 659 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 KLRB1Q12918 225 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 NDUFAF5Q5TEU4 345 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 C6orf163Q5TEZ5 329 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ABHD17BQ5VST6 288 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 CLEC6AQ6EIG7 209 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 DESI1Q6ICB0 168 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ISLR2Q6UXK2 745 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 LURAP1LQ8IV03 231 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 TMEM151BQ8IW70 566 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ST13P4Q8IZP2 240 aaPredicted RBP10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ZADH2Q8N4Q0 377 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 SLC5A8Q8N695 610 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 MORN4Q8NDC4 146 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 B3GNT7Q8NFL0 401 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 OR4K14Q8NGD5 310 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 OR6Y1Q8NGX8 325 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 MGARPQ8TDB4 240 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 TWIST2Q8WVJ9 160 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ZBTB9Q96C00 473 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ZNF354BQ96LW1 612 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 PPP3R2Q96LZ3 170 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 NUDT9Q9BW91 350 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ZNF552Q9H707 407 aaPredicted RBP10.55□□□□□ -0.72
SF3B6-201ENST00000233468 KCNK13Q9HB14 408 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 LRTM1Q9HBL6 345 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 GIMAP4Q9NUV9 329 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.55□□□□□ -0.72
SF3B6-201ENST00000233468 C1orf109Q9NX04 203 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 COPS7AQ9UBW8 275 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 RAP2CQ9Y3L5 183 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 CCDC88CQ9P219 2028 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 ANKRD12Q6UB98 2062 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 UQCRHLA0A096LP55 91 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 A0A1W2PR48 441 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 DYTNA2CJ06 578 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 LDB3O75112 727 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 AIFM1O95831 613 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 PDGFAP04085 211 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 ANXA4P09525 319 aaPredicted RBP10.54□□□□□ -0.72
SF3B6-201ENST00000233468 SLC35E2P0CK97 266 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 ALOX15P16050 662 aaPredicted RBP10.54□□□□□ -0.72
SF3B6-201ENST00000233468 BGNP21810 368 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 GALNSP34059 522 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 STT3AP46977 705 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 RPL14P50914 215 aaKnown RBP10.54□□□□□ -0.72
SF3B6-201ENST00000233468 CLCN2P51788 898 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 IGLV3-21P80748 117 aaPredicted RBP10.54□□□□□ -0.72
SF3B6-201ENST00000233468 FOLH1Q04609 750 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 ZNF763Q0D2J5 394 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 RAPSNQ13702 412 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 MPP2Q14168 576 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 NR6A1Q15406 480 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 HSP90B2PQ58FF3 399 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 C18orf63Q68DL7 685 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 SCIMPQ6UWF3 145 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 IGFL3Q6UXB1 125 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 LGI4Q8N135 537 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 TMEM52Q8NDY8 209 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 BRIX1Q8TDN6 353 aaKnown RBP10.54□□□□□ -0.72
SF3B6-201ENST00000233468 DYDC1Q8WWB3 177 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 MIB2Q96AX9 1013 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 ARL8AQ96BM9 186 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 VMP1Q96GC9 406 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 APIPQ96GX9 242 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 WDR77Q9BQA1 342 aaPredicted RBP10.54□□□□□ -0.72
SF3B6-201ENST00000233468 THAP1Q9NVV9 213 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 PTGFRNQ9P2B2 879 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 SHANK1Q9Y566 2161 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 PCDHA9Q9Y5H5 950 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 DNAJC15Q9Y5T4 150 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 ZNF780BQ9Y6R6 833 aa10.54□□□□□ -0.72
SF3B6-201ENST00000233468 CENPEQ02224 2701 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 NBPF19A0A087WUL8 3843 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 A8MUA0 341 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 A8MUI8 341 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 C17orf105B2RV13 164 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms