RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 STMN3Q9NZ72 180 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 PCDHA9Q9Y5H5 950 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 DNAJC15Q9Y5T4 150 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 EXPH5Q8NEV8 1989 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 FLNBO75369 2602 aaKnown RBP12.77□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.36
VEGFA-201ENST00000230480 SPTAN1Q13813 2472 aaKnown RBP12.77□□□□□ -0.37
VEGFA-201ENST00000230480 RGS16O15492 202 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-201ENST00000230480 NPHS1O60500 1241 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 KRT6AP02538 564 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 KRT6BP04259 564 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 TACR1P25103 407 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 PTGER1P34995 402 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 SERPINB4P48594 390 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 KRT6CP48668 564 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-201ENST00000230480 CORO7P57737 925 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 ZNF33BQ06732 778 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 TUBA3CQ13748 450 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 HSP90B2PQ58FF3 399 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 CCNYL2Q5T2Q4 361 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 NDUFAF5Q5TEU4 345 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 TUBA3EQ6PEY2 450 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 LYPD8Q6UX82 237 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 RNF165Q6ZSG1 346 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 RPS19BP1Q86WX3 136 aaKnown RBP12.77□□□□□ -0.37
VEGFA-201ENST00000230480 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 ZADH2Q8N4Q0 377 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 CISD2Q8N5K1 135 aaKnown RBP12.77□□□□□ -0.37
VEGFA-201ENST00000230480 ARL8AQ96BM9 186 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 SENP5Q96HI0 755 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-201ENST00000230480 CNDP1Q96KN2 507 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 FCRL1Q96LA6 429 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 C3orf30Q96M34 536 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 SMC6Q96SB8 1091 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 TMBIM4Q9HC24 238 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 ASF1BQ9NVP2 202 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 MS4A12Q9NXJ0 267 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 MAP10Q9P2G4 905 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 ZDHHC2Q9UIJ5 367 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 PHF11Q9UIL8 331 aa12.77□□□□□ -0.37
VEGFA-201ENST00000230480 USP9YO00507 2555 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-201ENST00000230480 FREM3P0C091 2139 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 DNAJC13O75165 2243 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 PCNX1Q96RV3 2341 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 BLACEA4D250 179 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 CLEC18AA5D8T8 446 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 LYPLA1O75608 230 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-201ENST00000230480 ALPPP05187 535 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 JUNP05412 331 aaKnown RBP12.76□□□□□ -0.37
VEGFA-201ENST00000230480 NR2F6P10588 404 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 PRPH2P23942 346 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 HMOX2P30519 316 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 PHEXP78562 749 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 CASP8Q14790 479 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 SPINK14Q6IE38 97 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 SLC48A1Q6P1K1 146 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 CLEC18BQ6UXF7 455 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 LGI4Q8N135 537 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 GBP7Q8N8V2 638 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-201ENST00000230480 CCDC63Q8NA47 563 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 CLEC18CQ8NCF0 446 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 MORN4Q8NDC4 146 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 OR1N1Q8NGS0 311 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 SLC2A12Q8TD20 617 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 C16orf78Q8WTQ4 265 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 SREK1Q8WXA9 508 aaKnown RBP12.76□□□□□ -0.37
VEGFA-201ENST00000230480 CNRIP1Q96F85 164 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-201ENST00000230480 SORT1Q99523 831 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 ANKRD10Q9NXR5 420 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 GIMAP2Q9UG22 337 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 MCM8Q9UJA3 840 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 MRPS33Q9Y291 106 aaKnown RBP12.76□□□□□ -0.37
VEGFA-201ENST00000230480 DLGAP4Q9Y2H0 992 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 ACTL7BQ9Y614 415 aa12.76□□□□□ -0.37
VEGFA-201ENST00000230480 TRBV11-1A0A0K0K1C0 115 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 OR5H15A6NDH6 313 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 C17orf105B2RV13 164 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 NCKAP5O14513 1909 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 AZIN1O14977 448 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 WISP1O95388 367 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 ZIC2O95409 532 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 NADKO95544 446 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 SLC35E2P0CK97 266 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 UROSP10746 265 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 ALOX15P16050 662 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 TRHRP34981 398 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 UQCRFS1P47985 274 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 NAA20P61599 178 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 KCNC4Q03721 635 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 BTKQ06187 659 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 STX4Q12846 297 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 SERTAD2Q14140 314 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 RCN2Q14257 317 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 ZNF169Q14929 603 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 RPUSD3Q6P087 351 aaKnown RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 CYP20A1Q6UW02 462 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 C9orf40Q8IXQ3 194 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 ZNF615Q8N8J6 731 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms