RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 FAM129BQ96TA1 746 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 RNF167Q9H6Y7 350 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 CLN6Q9NWW5 311 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 KCND3Q9UK17 655 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 ZNF670-ZNF695F2Z2N8 137 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 CACNB4O00305 520 aaPredicted RBP19.55■□□□□ 0.72
SNX3-201ENST00000230085 CTDSP2O14595 271 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 IFNA14P01570 189 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 OR56A5P0C7T3 313 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 IDSP22304 550 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 HNF1BP35680 557 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 PNLIPRP1P54315 467 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 GRHL2Q6ISB3 625 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 TSSK4Q6SA08 328 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 SPATC1Q76KD6 591 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 RDH10Q8IZV5 341 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 CHST14Q8NCH0 376 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 OR2AP1Q8NGE2 309 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 OR52N2Q8NGI0 321 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 ASB15Q8WXK1 588 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 TTC9Q92623 222 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 PHOX2BQ99453 314 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 COPS8Q99627 209 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 PIP5K1AQ99755 562 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 NIPSNAP1Q9BPW8 284 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 HHATLQ9HCP6 504 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 POLMQ9NP87 494 aaPredicted RBP19.55■□□□□ 0.72
SNX3-201ENST00000230085 ACER3Q9NUN7 267 aa19.55■□□□□ 0.72
SNX3-201ENST00000230085 CCNB2O95067 398 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 ALPPP05187 535 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 NUDT7P0C024 238 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 GKP32189 559 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 MLLT3P42568 568 aaPredicted RBP19.54■□□□□ 0.72
SNX3-201ENST00000230085 RECQLP46063 649 aaPredicted RBP19.54■□□□□ 0.72
SNX3-201ENST00000230085 IDH2P48735 452 aaKnown RBP19.54■□□□□ 0.72
SNX3-201ENST00000230085 RORCP51449 518 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 SNRPD1P62314 119 aaKnown RBP19.54■□□□□ 0.72
SNX3-201ENST00000230085 PSPHP78330 225 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 BCL2L1Q07817 233 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 ACSM2AQ08AH3 577 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 CHIT1Q13231 466 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 ELAVL3Q14576 367 aaKnown RBP19.54■□□□□ 0.72
SNX3-201ENST00000230085 NCF4Q15080 339 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 TSTQ16762 297 aaKnown RBP19.54■□□□□ 0.72
SNX3-201ENST00000230085 EXOC3L2Q2M3D2 409 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 SPIN4Q56A73 249 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 NXNL2Q5VZ03 156 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 ACSM2BQ68CK6 577 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 CACUL1Q86Y37 369 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 MAML2Q8IZL2 1156 aaPredicted RBP19.54■□□□□ 0.72
SNX3-201ENST00000230085 PSD4Q8NDX1 1056 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 TSTD1Q8NFU3 115 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 HMGB4Q8WW32 186 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 LRFN3Q9BTN0 628 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 RLIMQ9NVW2 624 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 SH3BP4Q9P0V3 963 aa19.54■□□□□ 0.72
SNX3-201ENST00000230085 GABRR3A8MPY1 467 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 K7ESF4 209 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 LAMTOR5O43504 91 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 CLDN7O95471 211 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 CPSF4O95639 269 aaKnown RBP19.53■□□□□ 0.72
SNX3-201ENST00000230085 CTSLP07711 333 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 GABRG2P18507 467 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 CSTF2P33240 577 aaKnown RBP eCLIP19.53■□□□□ 0.723e-6■■■□□ 17.8
SNX3-201ENST00000230085 PCBP3P57721 371 aaKnown RBP19.53■□□□□ 0.72
SNX3-201ENST00000230085 PFN3P60673 137 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 B4GALNT1Q00973 533 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 C19orf57Q0VDD7 668 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 GAB1Q13480 694 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 ZNF79Q15937 498 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 GLYR1Q49A26 553 aaPredicted RBP19.53■□□□□ 0.72
SNX3-201ENST00000230085 YIF1BQ5BJH7 314 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 ZNF770Q6IQ21 691 aaPredicted RBP19.53■□□□□ 0.72
SNX3-201ENST00000230085 TMPRSS11AQ6ZMR5 421 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 BTN2A2Q8WVV5 523 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 SH3KBP1Q96B97 665 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 MRGPRX1Q96LB2 322 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 OR5M11Q96RB7 305 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 ASPNQ9BXN1 380 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 MARCH7Q9H992 704 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 AMBNQ9NP70 447 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 NDUFB11Q9NX14 153 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 STUB1Q9UNE7 303 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 KMT2EQ8IZD2 1858 aa19.53■□□□□ 0.72
SNX3-201ENST00000230085 NUP214P35658 2090 aaPredicted RBP19.53■□□□□ 0.72
SNX3-201ENST00000230085 MEIOCA2RUB1 952 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 SSX4O60224 188 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 GUCY1B2O75343 617 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 YES1P07947 543 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 C1SP09871 688 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 RHCEP18577 417 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 NDUFV2P19404 249 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 NUDT6P53370 316 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 RAE1P78406 368 aaKnown RBP19.52■□□□□ 0.72
SNX3-201ENST00000230085 SPIBQ01892 262 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 SCN1BQ07699 218 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 PTGES3Q15185 160 aaKnown RBP19.52■□□□□ 0.72
SNX3-201ENST00000230085 ZNF630Q2M218 657 aaPredicted RBP19.52■□□□□ 0.72
SNX3-201ENST00000230085 TIGD3Q6B0B8 471 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 GALNT12Q8IXK2 581 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms