RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TNFSF10P50591 281 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 MLF1P58340 268 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 CASP8Q14790 479 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 ZNF169Q14929 603 aaPredicted RBP11.81□□□□□ -0.52
LSM5-201ENST00000223084 TLR1Q15399 786 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 IMPG1Q17R60 797 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 ZNF468Q5VIY5 522 aaPredicted RBP11.81□□□□□ -0.52
LSM5-201ENST00000223084 OR52E8Q6IFG1 317 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 FAM180BQ6P0A1 224 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 C16orf47Q6ZP98 133 aaPredicted RBP11.81□□□□□ -0.52
LSM5-201ENST00000223084 TRIM46Q7Z4K8 759 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 ANKRD42Q8N9B4 389 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 MORN4Q8NDC4 146 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 OR14A16Q8NHC5 309 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 CPT1CQ8TCG5 803 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 AGR3Q8TD06 166 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 SLC2A12Q8TD20 617 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 DAZLQ92904 295 aaKnown RBP11.81□□□□□ -0.52
LSM5-201ENST00000223084 RBM18Q96H35 190 aaKnown RBP11.81□□□□□ -0.52
LSM5-201ENST00000223084 TRMOQ9BU70 441 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 TUBB1Q9H4B7 451 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 HEY2Q9UBP5 337 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 MCM8Q9UJA3 840 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 PCDHA9Q9Y5H5 950 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 ACTL7BQ9Y614 415 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 PRRC2CQ9Y520 2896 aaKnown RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 GNG14A0A1W2PPG7 69 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 SYNDIG1LA6NDD5 238 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 OR5H15A6NDH6 313 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 ITM2AO43736 263 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 OR10H2O60403 315 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 LYPLA1O75608 230 aaPredicted RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 IL3P08700 152 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 LINC00032P0C843 101 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 DHRS4L1P0CG22 281 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 COX7A2P14406 83 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 PIK3R1P27986 724 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 TIA1P31483 386 aaKnown RBP eCLIP11.8□□□□□ -0.52
LSM5-201ENST00000223084 PLIN5Q00G26 463 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 TUBA3CQ13748 450 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 ZNF267Q14586 743 aaPredicted RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 CHI3L2Q15782 390 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 SPIN4Q56A73 249 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 SH2D4BQ5SQS7 431 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 KANK2Q63ZY3 851 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 TUBA3EQ6PEY2 450 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 LURAP1LQ8IV03 231 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 ST13P4Q8IZP2 240 aaPredicted RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 OR4K14Q8NGD5 310 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 OR6Y1Q8NGX8 325 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 OR2T11Q8NH01 316 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 ZNF721Q8TF20 911 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 C16orf78Q8WTQ4 265 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 MIB2Q96AX9 1013 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 SNRNP40Q96DI7 357 aaKnown RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 C11orf24Q96F05 449 aaPredicted RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 SENP5Q96HI0 755 aaPredicted RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 SIGLEC12Q96PQ1 595 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 CNPPD1Q9BV87 410 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 RNF32Q9H0A6 362 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 TMBIM4Q9HC24 238 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 ABI3Q9P2A4 366 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 CES1P1Q9UKY3 287 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 DLGAP4Q9Y2H0 992 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 NTNG1Q9Y2I2 539 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 TRAF6Q9Y4K3 522 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 CCL27Q9Y4X3 112 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 POLR3HQ9Y535 204 aaPredicted RBP11.8□□□□□ -0.52
LSM5-201ENST00000223084 DNAJC15Q9Y5T4 150 aa11.8□□□□□ -0.52
LSM5-201ENST00000223084 TRAV17A0A0B4J275 112 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 C1orf226A1L170 272 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 TMEM200CA6NKL6 621 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 SLC28A1O00337 649 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 TM9SF1O15321 606 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 GUCY1B2O75343 617 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 ERAL1O75616 437 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 ZFAND5O76080 213 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 ZWINTO95229 277 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 PTGER1P34995 402 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 FEN1P39748 380 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 XKP51811 444 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 MAGOHP61326 146 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 TRA2BP62995 288 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 ERVK-8P63133 956 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 FOXK1P85037 733 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 OC90Q02509 493 aaPredicted RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 SRSF11Q05519 484 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 UGT3A2Q3SY77 523 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 SPINK14Q6IE38 97 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 SLC48A1Q6P1K1 146 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 Q6ZSR9 355 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 CLYBLQ8N0X4 340 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 LGI4Q8N135 537 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 CDC26Q8NHZ8 85 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 PPP1R14CQ8TAE6 165 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 TWIST2Q8WVJ9 160 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 RIT1Q92963 219 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms