RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 DpcdQ8BPA8 203 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mdm1Q9D067 708 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 PrepQ9QUR6 710 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr549E9Q542 316 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Scarb2O35114 478 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rbbp9O88851 186 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ugt2b17P17717 530 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sox1P53783 391 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Echdc2Q3TLP5 296 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ces2cQ91WG0 561 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Arr3Q9EQP6 381 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Snap29Q9ERB0 260 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 B4galt2Q9Z2Y2 369 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm8973D3YX71 104 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm45692D3Z0A0 150 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Btbd16E9Q173 522 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm14139F6ZS36 494 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 JunP05627 334 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Scg5P12961 212 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zp2P20239 713 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc5a6Q5U4D8 634 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gpr19Q61121 415 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 GapdhsQ64467 440 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr384Q7TRX8 312 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gpr176Q80WT4 515 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 AntxrlQ8BVM2 641 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Trim61Q8JZK6 461 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Angptl6Q8R0Z6 457 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slit3Q9WVB4 1523 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ralgps1A2AR50 585 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 FpgtG5E8F4 590 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Emx2Q04744 253 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc45a4Q0P5V9 785 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Lasp1Q61792 263 aaKnown RBP11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Actr3bQ641P0 418 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cyp3a16Q64481 504 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pwwp2aQ69Z61 730 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zc3h14Q8BJ05 735 aaKnown RBP11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Elp6Q8BK75 266 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Smoc2Q8CD91 447 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nipal2Q91WC7 383 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rpl17Q9CPR4 184 aaKnown RBP11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zdhhc13Q9CWU2 622 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1253A2AUA2 318 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm10801F7C7Q0 168 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 KitlgP20826 273 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Wnt6P22727 364 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1251Q7TQZ3 318 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 B4galt7Q8R087 327 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cd207Q8VBX4 331 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr836Q8VFJ3 317 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Vmn2r110E9PWD5 858 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm7951E9Q0A2 213 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm6482F6YHC1 213 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm17124F6ZIG1 213 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 B020004C17RikJ3QP07 232 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zfp41Q02526 198 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Taf6Q62311 678 aaKnown RBP11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 BC080695Q66JY9 481 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rbm11Q80YT9 238 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Oasl1Q8VI94 511 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Scgb3a1Q920D7 104 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Spred2Q924S7 410 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tas1r2Q925I4 843 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tmem53Q9D0Z3 276 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pex10B1AUE5 324 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm8444F6XS56 118 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Wnt7aP24383 349 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cnn2Q08093 305 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Prl3a1Q78Y73 227 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cyp2d26Q8CIM7 500 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Hsd17b14E9Q3D4 273 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Prph2P15499 346 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 OgdhQ60597 1023 aaKnown RBP11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tatdn1Q6P8M1 295 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tas2r143Q7TQB9 293 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cstf2tQ8C7E9 632 aaKnown RBP11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Myoz3Q8R4E4 245 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Vmn1r71Q8VIC0 307 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rab4bQ91ZR1 213 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rnf11Q9QYK7 154 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Entpd2O55026 495 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cxcl12P40224 93 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rftn1Q6A0D4 554 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rsl1Q7M6Y1 485 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Kcnip3Q9QXT8 256 aa11.5□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm21876F6XK35 94 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr731F8VQB9 326 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Matn2O08746 956 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 LchnQ3UHG7 455 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Arhgef15Q5FWH6 849 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rxfp3Q8BGE9 472 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sec22cQ8BXT9 303 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dcun1d3Q8K0V2 304 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1043Q8VFK4 314 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Snx11Q91WL6 271 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 AireQ9Z0E3 552 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 AipO08915 330 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Papss2O88428 621 aa11.49□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zfp14P10755 501 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms