RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 DNAJB14Q8TBM8 379 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 KLHL29Q96CT2 875 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 REEP4Q9H6H4 257 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 GIMAP4Q9NUV9 329 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 C5AR2Q9P296 337 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 UTS2RQ9UKP6 389 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 ENTPD4Q9Y227 616 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 FREM2Q5SZK8 3169 aa20.27■□□□□ 0.84
TSPAN9-208ENST00000640568 SRRM3A6NNA2 597 aaPredicted RBP20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 SHOX2O60902 331 aaPredicted RBP20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 RECKO95980 971 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 NCF2P19878 526 aaPredicted RBP20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 PRPS1L1P21108 318 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 NME5P56597 212 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 FOXK2Q01167 660 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 SRSF6Q13247 344 aaKnown RBP20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 SERTAD2Q14140 314 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 TICAM1Q8IUC6 712 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 OR4N5Q8IXE1 308 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 OR4K14Q8NGD5 310 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 TSLPQ969D9 159 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 UCN3Q969E3 161 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 EXOSC8Q96B26 276 aaKnown RBP20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 VPS50Q96JG6 964 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 SLC45A3Q96JT2 553 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 EHD3Q9NZN3 535 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 RAXQ9Y2V3 346 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 ZNF780BQ9Y6R6 833 aa20.26■□□□□ 0.83
TSPAN9-208ENST00000640568 PCDH17O14917 1159 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 FGF17O60258 216 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 CAPNS1P04632 268 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 FURINP09958 794 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 COX7A2P14406 83 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 MMP11P24347 488 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 CLDN8P56748 225 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 ID2Q02363 134 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 SPACA3Q8IXA5 215 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 ZSCAN1Q8NBB4 408 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 C10orf82Q8WW14 230 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 PPCDCQ96CD2 204 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 PRPF18Q99633 342 aaKnown RBP20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 BRINP2Q9C0B6 783 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 NECTIN3Q9NQS3 549 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 SH3BP4Q9P0V3 963 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 ACACAQ13085 2346 aa20.25■□□□□ 0.83
TSPAN9-208ENST00000640568 ZNF891A8MT65 544 aaPredicted RBP20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 SCAMP2O15127 329 aaKnown RBP20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 GPR75O95800 540 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 CLNS1AP54105 237 aaKnown RBP20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 IRX1P78414 480 aaPredicted RBP20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 BIKQ13323 160 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 IL10RAQ13651 578 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 PDCD4Q53EL6 469 aaKnown RBP20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 PROSER1Q86XN7 944 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 TMEM151BQ8IW70 566 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 MIER2Q8N344 545 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 ANKRD9Q96BM1 317 aaPredicted RBP20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 MTERF3Q96E29 417 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 ZBTB18Q99592 522 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 ALOXE3Q9BYJ1 711 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 CES1P1Q9UKY3 287 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 GPR45Q9Y5Y3 372 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 WASHC1A8K0Z3 465 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 SNX3O60493 162 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 IFNA16P05015 189 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 METTL21CQ5VZV1 264 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 LANCL3Q6ZV70 420 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 SAMD14Q8IZD0 417 aaPredicted RBP20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 KRTCAP2Q8N6L1 136 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 NACC2Q96BF6 587 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 DGAT2Q96PD7 388 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 ATAD3AQ9NVI7 634 aa20.24■□□□□ 0.83
TSPAN9-208ENST00000640568 CEP295Q9C0D2 2601 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 MYOCOSA0A1B0GUC4 107 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 TCRBV16S1A1N1A0A5B0 115 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 CDC14CA4D256 554 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 PEX12O00623 359 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 OR10H2O60403 315 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 XKP51811 444 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 EFNA3P52797 238 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 OR4D2P58180 307 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 PLIN5Q00G26 463 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 EEF1A2Q05639 463 aaKnown RBP20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 SQLEQ14534 574 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 UGT8Q16880 541 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 CPTPQ5TA50 214 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 ANKRD26P1Q6NSI1 321 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 TMEM205Q6UW68 189 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 CCDC81Q6ZN84 652 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 ANKRD37Q7Z713 158 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 IP6K3Q96PC2 410 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 BBS4Q96RK4 519 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 CCT8L2Q96SF2 557 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 PELOQ9BRX2 385 aaKnown RBP20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 SLC35C2Q9NQQ7 365 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 PNO1Q9NRX1 252 aaKnown RBP20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 ZIM2Q9NZV7 527 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 ATP6V1HQ9UI12 483 aa20.23■□□□□ 0.83
TSPAN9-208ENST00000640568 EXO1Q9UQ84 846 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms