RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RC3H2Q9HBD1 1191 aaKnown RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 TM7SF3Q9NS93 570 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 ATP6V1HQ9UI12 483 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 WBP11Q9Y2W2 641 aaKnown RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 SYNDIG1LA6NDD5 238 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 PRR23AA6NEV1 266 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 CAV3P56539 151 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 DBPQ10586 325 aaPredicted RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 LRRC26Q2I0M4 334 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 TIMM50Q3ZCQ8 353 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 TCEAL5Q5H9L2 206 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 USP30Q70CQ3 517 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF367Q7RTV3 350 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 LACC1Q8IV20 430 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 ZSWIM3Q96MP5 696 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 QRSL1Q9H0R6 528 aaKnown RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 KLHL3Q9UH77 587 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 PCYT1BQ9Y5K3 369 aaPredicted RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 MYO10Q9HD67 2058 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 HIDE1A8MVS5 230 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 DYRK3O43781 588 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 MRPS14O60783 128 aaKnown RBP13.88□□□□□ -0.19
SCARB2-221ENST00000640341 CDRT1O95170 752 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 CLEC2LP0C7M8 214 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 OR12D1P0DN82 309 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 ARAFP10398 606 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 CBLP22681 906 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 DGKGP49619 791 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 PNLIPRP1P54315 467 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 MLLT1Q03111 559 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-221ENST00000640341 CLEC12AQ5QGZ9 265 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 TYW3Q6IPR3 259 aaKnown RBP13.88□□□□□ -0.19
SCARB2-221ENST00000640341 TMPRSS11AQ6ZMR5 421 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 CRELD1Q96HD1 420 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 LMLNQ96KR4 655 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 OPALINQ96PE5 141 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 MAPKAP1Q9BPZ7 522 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 TSSK6Q9BXA6 273 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 OSGEPL1Q9H4B0 414 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 SMURF1Q9HCE7 757 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 DYRK4Q9NR20 520 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 QSOX1O00391 747 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 PTTG1O95997 202 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 CSF2RAP15509 400 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 BUD31P41223 144 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-221ENST00000640341 RBBP4Q09028 425 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 C22orf42Q6IC83 251 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 C6orf120Q7Z4R8 191 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 SMAD5Q99717 465 aaKnown RBP13.88□□□□□ -0.19
SCARB2-221ENST00000640341 PRRG3Q9BZD7 231 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 MVB12BQ9H7P6 319 aa13.88□□□□□ -0.19
SCARB2-221ENST00000640341 PLD2O14939 933 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 FRS3O43559 492 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 SEMA7AO75326 666 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CSO75390 466 aaKnown RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 NR2F1P10589 423 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 LAG3P18627 525 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 PRKCDQ05655 676 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 NOGQ13253 232 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 TCTN3Q6NUS6 607 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 FAM83HQ6ZRV2 1179 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 KLHL6Q8WZ60 621 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 HHATLQ9HCP6 504 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 EQTNQ9NQ60 294 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 KLHL20Q9Y2M5 609 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 ZAR1LA6NP61 321 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 PLPP1O14494 284 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 IDH3BO43837 385 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CH25HO95992 272 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 H1F0P07305 194 aaKnown RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 DMPKQ09013 629 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 BAK1Q16611 211 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 OR2G6Q5TZ20 316 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CAMKMTQ7Z624 323 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 TECPR1Q7Z6L1 1165 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CPA6Q8N4T0 437 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 GPR32P1Q8NGA4 272 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 OR4D11Q8NGI4 311 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 SLC7A13Q8TCU3 470 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 UBASH3BQ8TF42 649 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 C1GALT1C1Q96EU7 318 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 TXNDC15Q96J42 360 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 BARHL1Q9BZE3 327 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 ANKRA2Q9H9E1 313 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 ANKHQ9HCJ1 492 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 THSD1Q9NS62 852 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 TEX10Q9NXF1 929 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 SPATA7Q9P0W8 599 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 IL20RAQ9UHF4 553 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 MOSPD1Q9UJG1 213 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 MKLN1Q9UL63 735 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 UGT2B17O75795 530 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 NTN1O95631 604 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CYP17A1P05093 508 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 C8orf89P0DMQ9 161 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 MMP12P39900 470 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 GSTM5P46439 218 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms