RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 ID2Q02363 134 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 SUZ12Q15022 739 aaKnown RBP7.35□□□□□ -1.23
NECAP1-221ENST00000639955 SPATS1Q496A3 300 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 LHX8Q68G74 356 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 KIAA1161Q6NSJ0 714 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 TRIM40Q6P9F5 258 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 USP30Q70CQ3 517 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 DIRAS2Q96HU8 199 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 ZSWIM3Q96MP5 696 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 ZNF717Q9BY31 904 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-221ENST00000639955 POLR2J3Q9H1A7 115 aaKnown RBP7.35□□□□□ -1.23
NECAP1-221ENST00000639955 REEP4Q9H6H4 257 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 CNIH4Q9P003 139 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 PCDHGB6Q9Y5F9 930 aa7.35□□□□□ -1.23
NECAP1-221ENST00000639955 PCYT1BQ9Y5K3 369 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-221ENST00000639955 TRBV5-4A0A0C4DH59 114 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 METTL15A6NJ78 407 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 TLR4O00206 839 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 NUAK1O60285 661 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 GPX5O75715 221 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 RPLP2P05387 115 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 CDK1P06493 297 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 SLC15A1P46059 708 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 HNMTP50135 292 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 CLDN2P57739 230 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 DEFA1P59665 94 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 DEFA3P59666 94 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 HNRNPA0Q13151 305 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 KEAP1Q14145 624 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 C5orf22Q49AR2 442 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 PYDC2Q56P42 97 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 ATAT1Q5SQI0 421 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 IRAK1BP1Q5VVH5 260 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 LYPLAL1Q5VWZ2 237 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 TTC23LQ6PF05 361 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 GDPD3Q7L5L3 318 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 TSEN54Q7Z6J9 526 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 IQCHQ86VS3 1027 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 LACC1Q8IV20 430 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 C16orf78Q8WTQ4 265 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 GATAD2BQ8WXI9 593 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 SLC9A6Q92581 669 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 DNAJA3Q96EY1 480 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 TMED9Q9BVK6 235 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 ZCCHC3Q9NUD5 404 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 PSORS1C1Q9UIG5 152 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 EXO1Q9UQ84 846 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 KCNK6Q9Y257 313 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 MAN2B2Q9Y2E5 1009 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 NTNG1Q9Y2I2 539 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 OR1A2Q9Y585 309 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 SMLR1H3BR10 107 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 PLD2O14939 933 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 PSIP1O75475 530 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 HOXB3P14651 431 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 HOXD10P28358 340 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 MAPK8P45983 427 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 INPP1P49441 399 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 AP1S2P56377 157 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 SEC23BQ15437 767 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 SNAPC1Q16533 368 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 MPEG1Q2M385 716 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 PAMR1Q6UXH9 720 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 PARS2Q7L3T8 475 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 RRM2BQ7LG56 351 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 FAM129CQ86XR2 697 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 FIBINQ8TAL6 211 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 SMAP2Q8WU79 429 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 TRMT61AQ96FX7 289 aaKnown RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 CAPNS2Q96L46 248 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 RACGAP1Q9H0H5 632 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 TEX10Q9NXF1 929 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 ZNF282Q9UDV7 671 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-221ENST00000639955 ANGPT4Q9Y264 503 aa7.34□□□□□ -1.23
NECAP1-221ENST00000639955 SCN4AP35499 1836 aa7.34□□□□□ -1.24
NECAP1-221ENST00000639955 A0A1W2PPK0 400 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 FAM183AA6NL82 134 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 CPSF4LA6NMK7 179 aaKnown RBP7.33□□□□□ -1.24
NECAP1-221ENST00000639955 GNB5O14775 395 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 TSPAN4O14817 238 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 KCNJ13O60928 360 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 FGF18O76093 207 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 TSPAN19P0C672 248 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 CYP2A6P11509 494 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-221ENST00000639955 ACP5P13686 325 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 TIMP2P16035 220 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 CD9P21926 228 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 RPS19P39019 145 aaKnown RBP7.33□□□□□ -1.24
NECAP1-221ENST00000639955 SSR2P43308 183 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 XKP51811 444 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 LIM2P55344 173 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 SLAMF1Q13291 335 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 CAMK1Q14012 370 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 DCST1Q5T197 706 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 MTFR2Q6P444 385 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 SYNPOQ8N3V7 929 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 L3MBTL4Q8NA19 623 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 VN1R2Q8NFZ6 395 aa7.33□□□□□ -1.24
NECAP1-221ENST00000639955 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.33□□□□□ -1.241e-8■■■■■ 31.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms