RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 PAQR4Q8N4S7 273 aaPredicted RBP6.87□□□□□ -1.31
NECAP1-220ENST00000639841 C7orf57Q8NEG2 295 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 OR52N4Q8NGI2 321 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 TSEN15Q8WW01 171 aaKnown RBP6.87□□□□□ -1.31
NECAP1-220ENST00000639841 TCP11Q8WWU5 503 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 PIBF1Q8WXW3 757 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 EMG1Q92979 244 aaKnown RBP6.87□□□□□ -1.31
NECAP1-220ENST00000639841 C17orf62Q9BQA9 187 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 GATA5Q9BWX5 397 aaPredicted RBP6.87□□□□□ -1.31
NECAP1-220ENST00000639841 TEKT3Q9BXF9 490 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 TDRD1Q9BXT4 1180 aaKnown RBP6.87□□□□□ -1.31
NECAP1-220ENST00000639841 ADGRE3Q9BY15 652 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 CDH20Q9HBT6 801 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 KLHL28Q9NXS3 571 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 TRPM5Q9NZQ8 1165 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 ADAM29Q9UKF5 820 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 AMFRQ9UKV5 643 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 IFT52Q9Y366 437 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 SPTBN4Q9H254 2564 aa6.87□□□□□ -1.31
NECAP1-220ENST00000639841 IGLV3-22A0A075B6J6 115 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 MAGEB16A2A368 324 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 ANHXE9PGG2 379 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 LAMTOR5O43504 91 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 SP9P0CG40 484 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 B4GALT1P15291 398 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 EPCAMP16422 314 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 IGFBP6P24592 240 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 COL8A1P27658 744 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 ACADVLP49748 655 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CCL11P51671 97 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 ELAVL2Q12926 359 aaKnown RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 DRP2Q13474 957 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PRKD1Q15139 912 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 MEP1AQ16819 746 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PRAMEF5Q5TYX0 476 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PRAMEF6Q5VXH4 476 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 TMPRSS11BQ86T26 416 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CRYBG2Q8N1P7 616 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 LINC01356Q8N9X3 169 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 SIDT2Q8NBJ9 832 aaKnown RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CHPT1Q8WUD6 406 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CRYGNQ8WXF5 182 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 GGHQ92820 318 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 TRIM62Q9BVG3 475 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 TEX101Q9BY14 249 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 ZMYND12Q9H0C1 365 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 SLC26A1Q9H2B4 701 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 Q9N2K0 584 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 KCNE5Q9UJ90 142 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 RAB23Q9ULC3 237 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PACSIN2Q9UNF0 486 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 GRIP1Q9Y3R0 1128 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PTPRZ1P23471 2315 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 NID2Q14112 1375 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 GVINP1Q7Z2Y8 2422 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 MIA3Q5JRA6 1907 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 IGKV6-21A0A0C4DH24 114 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 FAM240BA0A1B0GVZ2 78 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CXorf65A6NEN9 183 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 M0QZ24 198 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PDXKO00764 312 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 SDHDO14521 159 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 ABLIM1O14639 778 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 DFNA5O60443 496 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 TSPAN1O60635 241 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CDH16O75309 829 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 NIPSNAP2O75323 286 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PRNPP04156 253 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PTGFRP43088 359 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 RPS9P46781 194 aaKnown RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 RPS5P46782 204 aaKnown RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CEBPDP49716 269 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PKP1Q13835 747 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 NR1D2Q14995 579 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 ZNF770Q6IQ21 691 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 FAM166AQ6J272 317 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 PYHIN1Q6K0P9 492 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 SMG7Q92540 1137 aaKnown RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 HAS2Q92819 552 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 REPS1Q96D71 796 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 SLC22A12Q96S37 553 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 CHP1Q99653 195 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 SLC2A11Q9BYW1 496 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 TREM1Q9NP99 234 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 GPR173Q9NS66 373 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 ACSS1Q9NUB1 689 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 NOCTQ9UK39 431 aaKnown RBP6.86□□□□□ -1.31
NECAP1-220ENST00000639841 KLK4Q9Y5K2 254 aa6.86□□□□□ -1.31
NECAP1-220ENST00000639841 RIF1Q5UIP0 2472 aaKnown RBP6.85□□□□□ -1.31
NECAP1-220ENST00000639841 WDR81Q562E7 1941 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 TMEM191CA6NGB0 347 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 MATN3O15232 486 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 CLPXO76031 633 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 TMEM191BP0C7N4 346 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 CEACAM1P13688 526 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 FBLP22087 321 aaKnown RBP6.85□□□□□ -1.31
NECAP1-220ENST00000639841 HRH2P25021 359 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 FPR3P25089 353 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 CNR2P34972 360 aa6.85□□□□□ -1.31
NECAP1-220ENST00000639841 SSTP61278 116 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms