RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 NRARPQ7Z6K4 114 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 OR8J1Q8NGP2 316 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 ASB15Q8WXK1 588 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZNF689Q96CS4 500 aaPredicted RBP19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 NDUFB11Q9NX14 153 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 CLEC2DQ9UHP7 191 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 CACNB4O00305 520 aaPredicted RBP19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 MFN2O95140 757 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 RB1P06400 928 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 CKMT1AP12532 417 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 TYRP14679 529 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 LAG3P18627 525 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 ITGB7P26010 798 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 DGKEP52429 567 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 RUNX1T1Q06455 604 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 SEC23BQ15437 767 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 RPS26P11Q5JNZ5 115 aaPredicted RBP19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 TMEM215Q68D42 235 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 HORMAD2Q8N7B1 307 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 PROKR2Q8NFJ6 384 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 GPR32P1Q8NGA4 272 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 IRF7Q92985 503 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 TEFMQ96QE5 360 aaKnown RBP19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 HYKKA2RU49 373 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 OR10H3O60404 316 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 LILRB3O75022 631 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 FEN1P39748 380 aaKnown RBP19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 NNMTP40261 264 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 XKP51811 444 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZNF91Q05481 1191 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 TCTN3Q6NUS6 607 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 MMP21Q8N119 569 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 NATD1Q8N6N6 113 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 NANOGP1Q8N7R0 232 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 OR9Q1Q8NGQ5 310 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 VANGL1Q8TAA9 524 aaPredicted RBP19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 GPR151Q8TDV0 419 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 OR5P2Q8WZ92 322 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 TMEM19Q96HH6 336 aa19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZCCHC2Q9C0B9 1178 aaKnown RBP19.13■□□□□ 0.65
SYNGAP1-227ENST00000638142 IQCMA0A1B0GVH7 501 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 H3BN98 237 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 HOXC11O43248 304 aaPredicted RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 SOX14O95416 240 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 H1F0P07305 194 aaKnown RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 IRS1P35568 1242 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 PSPHP78330 225 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 MLLT11Q13015 90 aaPredicted RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 C1DQ13901 141 aaKnown RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 ARMC4Q5T2S8 1044 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 MFSD4BQ5TF39 518 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 TMIGD1Q6UXZ0 262 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZNF517Q6ZMY9 492 aaPredicted RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 VASH1Q7L8A9 365 aaPredicted RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 SLC9B2Q86UD5 537 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZNF740Q8NDX6 193 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 HCAR2Q8TDS4 363 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 SETD7Q8WTS6 366 aaKnown RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 LRIG1Q96JA1 1093 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 MRGPRX3Q96LB0 322 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 AHSPQ9NZD4 102 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 SCO2O43819 266 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 DDCP20711 480 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 DDOSTP39656 456 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 OCLNQ16625 522 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 TNFAIP8L2Q6P589 184 aaPredicted RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 VN1R5Q7Z5H4 357 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 GPR65Q8IYL9 337 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 LMNTD1Q8N9Z9 388 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 CYB5D2Q8WUJ1 264 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 POLR2J2Q9GZM3 115 aaKnown RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 POLR2J3Q9H1A7 115 aaKnown RBP19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 MUTYHQ9UIF7 546 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 SSR3Q9UNL2 185 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 SNX11Q9Y5W9 270 aa19.12■□□□□ 0.65
SYNGAP1-227ENST00000638142 CARNS1A5YM72 827 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 PI15O43692 258 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 TPST2O60704 377 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 LILRB5O75023 590 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 HBQ1P09105 142 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 SMIM11AP58511 58 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 WDR5P61964 334 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 RPS26P62854 115 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 NXNL2Q5VZ03 156 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 RAB43Q86YS6 212 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 SLC6A18Q96N87 628 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 TSSK6Q9BXA6 273 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 NEUROD4Q9HD90 331 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 SNTG1Q9NSN8 517 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 CCDC88CQ9P219 2028 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 TBX19O60806 448 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 SEMA7AO75326 666 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 C8AP07357 584 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 DDX5P17844 614 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 CXCR2P25025 360 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 CA8P35219 290 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 HEPACAMQ14CZ8 416 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZNF79Q15937 498 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 PGBD2Q6P3X8 592 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 CCDC149Q6ZUS6 474 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms