RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ACAD11Q709F0 780 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 TBC1D1Q86TI0 1168 aaPredicted RBP17.08■□□□□ 0.32
CLN6-220ENST00000637450 OR4N5Q8IXE1 308 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 UCK2Q9BZX2 261 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 OR51B5Q9H339 312 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 PRM3Q9NNZ6 103 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 SACM1LQ9NTJ5 587 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 MS4A12Q9NXJ0 267 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 COPS7AQ9UBW8 275 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 HIVEP1P15822 2718 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 ZNF407Q9C0G0 2248 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 NKX2-6A6NCS4 301 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 OR14I1A6ND48 311 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 IGKV3-11P04433 115 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 P04436 131 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 MTHFD2P13995 350 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 EPB42P16452 691 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 PIK3CBP42338 1070 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 MAGEA4P43358 317 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 NUP107P57740 925 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 CAV1Q03135 178 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 FOXO1Q12778 655 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 ASPHQ12797 758 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 SLMAPQ14BN4 828 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 FAM47EQ6ZV65 393 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 CCDC71Q8IV32 467 aaPredicted RBP17.07■□□□□ 0.32
CLN6-220ENST00000637450 FAM109AQ8N4B1 249 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 TMEM251Q8N6I4 163 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 HUS1BQ8NHY5 278 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 NUBPLQ8TB37 319 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 FBXO25Q8TCJ0 367 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 FBF1Q8TES7 1133 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 TANKQ92844 425 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 RGMAQ96B86 450 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 PPWD1Q96BP3 646 aaKnown RBP17.07■□□□□ 0.32
CLN6-220ENST00000637450 NXNL1Q96CM4 212 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 RBM18Q96H35 190 aaKnown RBP17.07■□□□□ 0.32
CLN6-220ENST00000637450 DGAT2Q96PD7 388 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 SMC6Q96SB8 1091 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 SORBS1Q9BX66 1292 aaKnown RBP17.07■□□□□ 0.32
CLN6-220ENST00000637450 RPF2Q9H7B2 306 aaKnown RBP17.07■□□□□ 0.32
CLN6-220ENST00000637450 KCNJ16Q9NPI9 418 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 NPDC1Q9NQX5 325 aaPredicted RBP17.07■□□□□ 0.32
CLN6-220ENST00000637450 PNPLA3Q9NST1 481 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 UTP11Q9Y3A2 253 aaKnown RBP17.07■□□□□ 0.32
CLN6-220ENST00000637450 TSC22D4Q9Y3Q8 395 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 LIPGQ9Y5X9 500 aa17.07■□□□□ 0.32
CLN6-220ENST00000637450 BCKDKO14874 412 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 CCL3P10147 92 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 STX2P32856 288 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 MAGEA5P43359 124 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 DNASE1L1P49184 302 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 C2orf54Q08AI8 447 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 NAB1Q13506 487 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 DGAT2L6Q6ZPD8 337 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 TRILQ7L0X0 811 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 GPR180Q86V85 440 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 CCDC25Q86WR0 208 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 C9orf40Q8IXQ3 194 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 ZCCHC7Q8N3Z6 543 aaKnown RBP17.06■□□□□ 0.32
CLN6-220ENST00000637450 RNF175Q8N4F7 328 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 TEX9Q8N6V9 391 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 OR5M9Q8NGP3 310 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 OR5M3Q8NGP4 307 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 RHEBL1Q8TAI7 183 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 SH2D2AQ9NP31 389 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 TUBA8Q9NY65 449 aaPredicted RBP17.06■□□□□ 0.32
CLN6-220ENST00000637450 ACOT9Q9Y305 439 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 ATG4BQ9Y4P1 393 aa17.06■□□□□ 0.32
CLN6-220ENST00000637450 DNAJC13O75165 2243 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 FAM90A27PA6NNH2 459 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 SYCE1LA8MT33 242 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 HRKO00198 91 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 PLPP1O14494 284 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 SUSD5O60279 629 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 ACVR2AP27037 513 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 MSX1P28360 303 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 TLX1P31314 330 aaPredicted RBP17.05■□□□□ 0.32
CLN6-220ENST00000637450 ARFIP1P53367 373 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 GUCY2DQ02846 1103 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 FOLH1Q04609 750 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 DDX39BQ13838 428 aaKnown RBP17.05■□□□□ 0.32
CLN6-220ENST00000637450 SLC10A1Q14973 349 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 TESK1Q15569 626 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 TRADDQ15628 312 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 ZNF791Q3KP31 576 aaPredicted RBP17.05■□□□□ 0.32
CLN6-220ENST00000637450 LIPJQ5W064 366 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 C18orf63Q68DL7 685 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 ZDHHC24Q6UX98 284 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 CENPLQ8N0S6 344 aaPredicted RBP17.05■□□□□ 0.32
CLN6-220ENST00000637450 SLC15A4Q8N697 577 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 MTERF1Q99551 399 aaKnown RBP17.05■□□□□ 0.32
CLN6-220ENST00000637450 CENPKQ9BS16 269 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 SEMA4BQ9NPR2 832 aaPredicted RBP17.05■□□□□ 0.32
CLN6-220ENST00000637450 DMRT3Q9NQL9 472 aa17.05■□□□□ 0.32
CLN6-220ENST00000637450 ANKRD17O75179 2603 aaKnown RBP17.05■□□□□ 0.32
CLN6-220ENST00000637450 ATP6AP2A0A1C7CYW4 349 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 FOXO6A8MYZ6 492 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 AQP7O14520 342 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms