RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 YIPF1Q9Y548 306 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PNMTP11086 282 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 UQCRC2P22695 453 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 EDNRBP24530 442 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 F2RP25116 425 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 GPX6P59796 221 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ROR2Q01974 943 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SERINC3Q13530 473 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PTPRCAPQ14761 206 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 NTRK3Q16288 839 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 EXOC3L2Q2M3D2 409 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CREB3L2Q70SY1 520 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ZSWIM9Q86XI8 627 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CREG2Q8IUH2 290 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CCDC116Q8IYX3 515 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PRR18Q8N4B5 295 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CNEP1R1Q8N9A8 125 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 AGAP11Q8TF27 550 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 RBCK1Q9BYM8 510 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 L2HGDHQ9H9P8 463 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 DECR2Q9NUI1 292 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 APOBEC3BQ9UH17 382 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 LOC102725191A0A1B0GVB3 256 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 A0A1W2PPW3 197 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 KLHL33A6NCF5 533 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 USP2O75604 605 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PRKD3O94806 890 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CAPN3P20807 821 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 HOXC8P31273 242 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 DAOAP59103 153 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 RPS13P62277 151 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CD83Q01151 205 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF630Q2M218 657 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SH3D19Q5HYK7 790 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 KHDC1LQ5JSQ8 128 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 GARNL3Q5VVW2 1013 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 LPCAT4Q643R3 524 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 EEF1DP3Q658K8 133 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 UEVLDQ8IX04 471 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PSD4Q8NDX1 1056 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 NLGN4YQ8NFZ3 816 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 OR5T1Q8NG75 326 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 UPRTQ96BW1 309 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 HS6ST2Q96MM7 605 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CCDC32Q9BV29 185 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 DUSP23Q9BVJ7 150 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TSSK6Q9BXA6 273 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SLC29A3Q9BZD2 475 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 MAN2C1Q9NTJ4 1040 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 FAM120CQ9NX05 1096 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SCML2Q9UQR0 700 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 RBMX2Q9Y388 322 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 WNT6Q9Y6F9 365 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 DIP2BQ9P265 1576 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TCRBV5S4A2TA0A5A2 114 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 KLRG2A4D1S0 409 aaPredicted RBP5.34□□□□□ -1.56
SCN1A-209ENST00000635750 H7C2Y5 167 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 HTR2AP28223 471 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 DGKQP52824 942 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 PPM1JQ5JR12 505 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 VWA5B1Q5TIE3 1220 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 FIGNL1Q6PIW4 674 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 ADGRA1Q86SQ6 560 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 PIM3Q86V86 326 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF695Q8IW36 515 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 FUKQ8N0W3 1084 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 OR5H2Q8NGV7 314 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 RNF128Q8TEB7 428 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 LRTOMTQ8WZ04 291 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 UCN3Q969E3 161 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 CIDECQ96AQ7 238 aaPredicted RBP5.34□□□□□ -1.56
SCN1A-209ENST00000635750 PYCR2Q96C36 320 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 PYURFQ96I23 114 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 DUSP9Q99956 384 aaKnown RBP5.34□□□□□ -1.56
SCN1A-209ENST00000635750 HOXD1Q9GZZ0 328 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 CLEC4EQ9ULY5 219 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 CA5BQ9Y2D0 317 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 NCOA3Q9Y6Q9 1424 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 A0A0U1RQJ8 604 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 MYBPHLA2RUH7 354 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 CD72P21854 359 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 CX3CR1P49238 355 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 POU3F4P49335 361 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 LRIT3Q3SXY7 679 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF805Q5CZA5 627 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 OR2T5Q6IEZ7 315 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 GSG1LQ6UXU4 331 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 GALNT15Q8N3T1 639 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 SLC5A8Q8N695 610 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 OR11L1Q8NGX0 322 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 OR2T29Q8NH02 315 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF675Q8TD23 568 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 FBXL8Q96CD0 374 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 HSPBAP1Q96EW2 488 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 LRIG1Q96JA1 1093 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 FBXL18Q96ME1 805 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF559Q9BR84 538 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 ACP6Q9NPH0 428 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 SLC17A7Q9P2U7 560 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms