RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ICA1LQ8NDH6 482 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 TCP11Q8WWU5 503 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 PRCCQ92733 491 aaPredicted RBP2.49□□□□□ -2.01
VBP1-204ENST00000625964 TEKT1Q969V4 418 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 MRPL24Q96A35 216 aaKnown RBP2.49□□□□□ -2.01
VBP1-204ENST00000625964 ESAMQ96AP7 390 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 ULK4Q96C45 1275 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 AP2M1Q96CW1 435 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 RBM18Q96H35 190 aaKnown RBP2.49□□□□□ -2.01
VBP1-204ENST00000625964 PCED1BQ96HM7 432 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 CNOT6LQ96LI5 555 aaKnown RBP2.49□□□□□ -2.01
VBP1-204ENST00000625964 GTF3C4Q9UKN8 822 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 ITM2BQ9Y287 266 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 HCFC1P51610 2035 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 ZNF318Q5VUA4 2279 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 ACEP12821 1306 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 UMODL1Q5DID0 1318 aa2.49□□□□□ -2.01
VBP1-204ENST00000625964 ATP6AP2A0A1C7CYW4 349 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 A0A1W2PQ72 361 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 ZNF487B1APH4 448 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 KIAA0513O60268 411 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 ANXA9O76027 345 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 PIGRP01833 764 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 HSP90AB1P08238 724 aaKnown RBP2.48□□□□□ -2.01
VBP1-204ENST00000625964 DUX4L4P0CJ87 422 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 CPA3P15088 417 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 OR1D2P34982 312 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 CCR4P51679 360 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 RPL27P61353 136 aaKnown RBP2.48□□□□□ -2.01
VBP1-204ENST00000625964 ANKRD20A4Q4UJ75 823 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 ANKRD20A8PQ5CZ79 823 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 ANKRD20A2Q5SQ80 823 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 DCAF12Q5T6F0 453 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 ANKRD20A1Q5TYW2 823 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 ANKRD20A3Q5VUR7 823 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 GBP6Q6ZN66 633 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 SIAH3Q8IW03 269 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 CCDC83Q8IWF9 413 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 THEM5Q8N1Q8 247 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 TRPV3Q8NET8 790 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 BEST4Q8NFU0 473 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 MRAPQ8TCY5 172 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 GGHQ92820 318 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 SNRNP40Q96DI7 357 aaKnown RBP2.48□□□□□ -2.01
VBP1-204ENST00000625964 MCCC1Q96RQ3 725 aaPredicted RBP2.48□□□□□ -2.01
VBP1-204ENST00000625964 RAB40CQ96S21 281 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 SLITRK2Q9H156 845 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 GRPEL1Q9HAV7 217 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 DNAJC17Q9NVM6 304 aaKnown RBP2.48□□□□□ -2.01
VBP1-204ENST00000625964 EIF3KQ9UBQ5 218 aaKnown RBP2.48□□□□□ -2.01
VBP1-204ENST00000625964 B4GALT7Q9UBV7 327 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 RSPH14Q9UHP6 348 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 PSORS1C1Q9UIG5 152 aa2.48□□□□□ -2.01
VBP1-204ENST00000625964 FAM149AA5PLN7 773 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 MCF2LO15068 1137 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 TTI1O43156 1089 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 STX6O43752 255 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 CSDE1O75534 798 aaKnown RBP2.47□□□□□ -2.01
VBP1-204ENST00000625964 RHBDL1O75783 438 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 UMPSP11172 480 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 FOSL2P15408 326 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 GPX3P22352 226 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 GLRA1P23415 457 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 HMGCS2P54868 508 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 ST8SIA6P61647 398 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 PPIAP62937 165 aaKnown RBP2.47□□□□□ -2.01
VBP1-204ENST00000625964 TRA2BP62995 288 aaKnown RBP2.47□□□□□ -2.01
VBP1-204ENST00000625964 NAAAQ02083 359 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 SCARB2Q14108 478 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 ABRAXAS2Q15018 415 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 MEP1BQ16820 701 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 LINC00242Q5T6M2 205 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 FHL5Q5TD97 284 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 NHLRC1Q6VVB1 395 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 WDR49Q8IV35 697 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 NAXDQ8IW45 347 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 CLYBLQ8N0X4 340 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 NUP93Q8N1F7 819 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 OR1K1Q8NGR3 316 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 GOT1L1Q8NHS2 421 aaPredicted RBP2.47□□□□□ -2.01
VBP1-204ENST00000625964 C16orf58Q96GQ5 468 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 PANX3Q96QZ0 392 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 RANBP9Q96S59 729 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 SSX3Q99909 188 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 ADPGKQ9BRR6 497 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 WWP1Q9H0M0 922 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 ZWILCHQ9H900 591 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 SLC6A5Q9Y345 797 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 ABCA7Q8IZY2 2146 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 POGZQ7Z3K3 1410 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 C13orf42A0A1B0GVH6 325 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 SLC33A1O00400 549 aaPredicted RBP2.47□□□□□ -2.01
VBP1-204ENST00000625964 SRPX2O60687 465 aaPredicted RBP2.47□□□□□ -2.01
VBP1-204ENST00000625964 IGHG3P01860 377 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 FCGR3AP08637 254 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 HSD17B1P14061 328 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 CALML3P27482 149 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 PPP2R1BP30154 601 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 HMGCLP35914 325 aa2.47□□□□□ -2.01
VBP1-204ENST00000625964 MFGE8Q08431 387 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms