RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SGPP1Q9BX95 441 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 UBQLN3Q9H347 655 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 PACSIN3Q9UKS6 424 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
SNX1-214ENST00000625244 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
SNX1-214ENST00000625244 ZNF189O75820 626 aaPredicted RBP12.65□□□□□ -0.38
SNX1-214ENST00000625244 TNFSF13O75888 250 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 PLAUP00749 431 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 NMBRP28336 390 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 IDUAP35475 653 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 ACVR1BP36896 505 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 BTN3A2P78410 334 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 OCRLQ01968 901 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 TBL3Q12788 808 aaKnown RBP12.65□□□□□ -0.38
SNX1-214ENST00000625244 ETFDHQ16134 617 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 ZNF704Q6ZNC4 412 aaPredicted RBP12.65□□□□□ -0.38
SNX1-214ENST00000625244 PIWIL4Q7Z3Z4 852 aaKnown RBP12.65□□□□□ -0.38
SNX1-214ENST00000625244 ANKRD53Q8N9V6 530 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 FAM13CQ8NE31 585 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 OR14A16Q8NHC5 309 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 SLC2A12Q8TD20 617 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 ABTB1Q969K4 478 aaPredicted RBP12.65□□□□□ -0.38
SNX1-214ENST00000625244 ZFP3Q96NJ6 502 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 TM9SF2Q99805 663 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 CNIH4Q9P003 139 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 VTI1BQ9UEU0 232 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 PYCARDQ9ULZ3 195 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 LAMP3Q9UQV4 416 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 MED16Q9Y2X0 877 aa12.65□□□□□ -0.38
SNX1-214ENST00000625244 MED12LQ86YW9 2145 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 NOTCH1P46531 2555 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 A0A0G2JN53 185 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 ETHE1O95571 254 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 F7P08709 466 aaPredicted RBP12.64□□□□□ -0.39
SNX1-214ENST00000625244 CYP4B1P13584 511 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 AHRP35869 848 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 UGT2B10P36537 528 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 CD79BP40259 229 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 NAGLUP54802 743 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 TTLL9Q3SXZ7 439 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 PCID2Q5JVF3 399 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 MRNIPQ6NTE8 343 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 BHLHB9Q6PI77 547 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 ZNF474Q6S9Z5 364 aaPredicted RBP12.64□□□□□ -0.39
SNX1-214ENST00000625244 SDCCAG8Q86SQ7 713 aaPredicted RBP12.64□□□□□ -0.39
SNX1-214ENST00000625244 GABPB2Q8TAK5 448 aaPredicted RBP12.64□□□□□ -0.39
SNX1-214ENST00000625244 ZNF721Q8TF20 911 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 MAIP1Q8WWC4 291 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 RUNDC3BQ96NL0 473 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 GNRHR2Q96P88 292 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 CSF3RQ99062 836 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 ALOXE3Q9BYJ1 711 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 ADAMTS6Q9UKP5 1117 aa12.64□□□□□ -0.39
SNX1-214ENST00000625244 URADA6NGE7 173 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 C17orf105B2RV13 164 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 MSTNO14793 375 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 ADAM11O75078 769 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNX1-214ENST00000625244 VAPBO95292 243 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 TNNI3P19429 210 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 RPL22P35268 128 aaKnown RBP12.63□□□□□ -0.39
SNX1-214ENST00000625244 PCYT1AP49585 367 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 RAB38P57729 211 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 SESN2P58004 480 aaPredicted RBP12.63□□□□□ -0.39
SNX1-214ENST00000625244 GNG11P61952 73 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 FNDC7Q5VTL7 733 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 BICRALQ6AI39 1079 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 DNM1P46Q6ZS02 220 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 SH2D5Q6ZV89 423 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 ADGRE4PQ86SQ3 457 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 C9orf40Q8IXQ3 194 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 ZNF595Q8IYB9 648 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 SLC35F6Q8N357 371 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 ZNF611Q8N823 705 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 WNT2BQ93097 391 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 PYCR2Q96C36 320 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 SNF8Q96H20 258 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 ART5Q96L15 291 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 OR4K3Q96R72 315 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 TCF12Q99081 682 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 HAUS8Q9BT25 410 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 SLCO5A1Q9H2Y9 848 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 TMEM160Q9NX00 188 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 PDE10AQ9Y233 779 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 IKBKGQ9Y6K9 419 aa12.63□□□□□ -0.39
SNX1-214ENST00000625244 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.62□□□□□ -0.39
SNX1-214ENST00000625244 A0A1W2PNV4 684 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 OVOL3O00110 214 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 CYR61O00622 381 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 HS3ST1O14792 307 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms