RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TLX2O43763 284 aaPredicted RBP8.82□□□□□ -1
GGA3-223ENST00000621870 MPZL2O60487 215 aa8.82□□□□□ -1
GGA3-223ENST00000621870 PSIP1O75475 530 aaKnown RBP8.82□□□□□ -1
GGA3-223ENST00000621870 SERPINA3P01011 423 aa8.82□□□□□ -1
GGA3-223ENST00000621870 KDELR2P33947 212 aa8.82□□□□□ -1
GGA3-223ENST00000621870 CCR2P41597 374 aa8.82□□□□□ -1
GGA3-223ENST00000621870 FNTBP49356 437 aa8.82□□□□□ -1
GGA3-223ENST00000621870 CLDN8P56748 225 aa8.82□□□□□ -1
GGA3-223ENST00000621870 ROR2Q01974 943 aaKnown RBP8.82□□□□□ -1
GGA3-223ENST00000621870 FCHO2Q0JRZ9 810 aa8.82□□□□□ -1
GGA3-223ENST00000621870 MAPK14Q16539 360 aa8.82□□□□□ -1
GGA3-223ENST00000621870 SPRED3Q2MJR0 410 aa8.82□□□□□ -1
GGA3-223ENST00000621870 VMACQ2NL98 169 aa8.82□□□□□ -1
GGA3-223ENST00000621870 IQCCQ4KMZ1 466 aa8.82□□□□□ -1
GGA3-223ENST00000621870 PYDC2Q56P42 97 aa8.82□□□□□ -1
GGA3-223ENST00000621870 FGF14Q92915 247 aa8.82□□□□□ -1
GGA3-223ENST00000621870 SLC6A18Q96N87 628 aa8.82□□□□□ -1
GGA3-223ENST00000621870 TREX1Q9NSU2 369 aa8.82□□□□□ -1
GGA3-223ENST00000621870 LIPT1Q9Y234 373 aa8.82□□□□□ -1
GGA3-223ENST00000621870 PHIPQ8WWQ0 1821 aa8.82□□□□□ -1
GGA3-223ENST00000621870 TMEM265A0A087WTH1 108 aa8.82□□□□□ -1
GGA3-223ENST00000621870 A0A0J9YY10 115 aa8.82□□□□□ -1
GGA3-223ENST00000621870 SGK494L7N484 410 aa8.82□□□□□ -1
GGA3-223ENST00000621870 EIF1AYO14602 144 aaKnown RBP8.82□□□□□ -1
GGA3-223ENST00000621870 VILLO15195 856 aa8.82□□□□□ -1
GGA3-223ENST00000621870 FMO3P31513 532 aa8.82□□□□□ -1
GGA3-223ENST00000621870 STAT5AP42229 794 aa8.82□□□□□ -1
GGA3-223ENST00000621870 NR0B1P51843 470 aaKnown RBP8.82□□□□□ -1
GGA3-223ENST00000621870 YPEL5P62699 121 aa8.82□□□□□ -1
GGA3-223ENST00000621870 RHDQ02161 417 aa8.82□□□□□ -1
GGA3-223ENST00000621870 MERTKQ12866 999 aa8.82□□□□□ -1
GGA3-223ENST00000621870 PON3Q15166 354 aa8.82□□□□□ -1
GGA3-223ENST00000621870 ZNF77Q15935 545 aa8.82□□□□□ -1
GGA3-223ENST00000621870 KCTD21Q4G0X4 260 aa8.82□□□□□ -1
GGA3-223ENST00000621870 LCN1P1Q5VSP4 162 aa8.82□□□□□ -1
GGA3-223ENST00000621870 LARP4Q71RC2 724 aaKnown RBP eCLIP8.82□□□□□ -1
GGA3-223ENST00000621870 OR13H1Q8NG92 308 aa8.82□□□□□ -1
GGA3-223ENST00000621870 GPR150Q8NGU9 434 aa8.82□□□□□ -1
GGA3-223ENST00000621870 ELSPBP1Q96BH3 223 aa8.82□□□□□ -1
GGA3-223ENST00000621870 C11orf24Q96F05 449 aaPredicted RBP8.82□□□□□ -1
GGA3-223ENST00000621870 INSM2Q96T92 566 aaPredicted RBP8.82□□□□□ -1
GGA3-223ENST00000621870 SORBS1Q9BX66 1292 aaKnown RBP8.82□□□□□ -1
GGA3-223ENST00000621870 COMMD4Q9H0A8 199 aa8.82□□□□□ -1
GGA3-223ENST00000621870 OR51I1Q9H343 314 aa8.82□□□□□ -1
GGA3-223ENST00000621870 EHD1Q9H4M9 534 aa8.82□□□□□ -1
GGA3-223ENST00000621870 OBP2AQ9NY56 170 aa8.82□□□□□ -1
GGA3-223ENST00000621870 KCMF1Q9P0J7 381 aa8.82□□□□□ -1
GGA3-223ENST00000621870 COL22A1Q8NFW1 1626 aaPredicted RBP8.82□□□□□ -1
GGA3-223ENST00000621870 RBMXL2O75526 392 aaKnown RBP8.82□□□□□ -1
GGA3-223ENST00000621870 ZNF821O75541 412 aaPredicted RBP8.82□□□□□ -1
GGA3-223ENST00000621870 SOX30O94993 753 aa8.82□□□□□ -1
GGA3-223ENST00000621870 P04436 131 aa8.82□□□□□ -1
GGA3-223ENST00000621870 ZNF3P17036 446 aa8.82□□□□□ -1
GGA3-223ENST00000621870 AOAHP28039 575 aa8.82□□□□□ -1
GGA3-223ENST00000621870 MMP12P39900 470 aa8.82□□□□□ -1
GGA3-223ENST00000621870 OR1D4P47884 311 aa8.82□□□□□ -1
GGA3-223ENST00000621870 CHAF1BQ13112 559 aa8.82□□□□□ -1
GGA3-223ENST00000621870 SMAD4Q13485 552 aaKnown RBP8.82□□□□□ -1
GGA3-223ENST00000621870 C5orf22Q49AR2 442 aa8.82□□□□□ -1
GGA3-223ENST00000621870 CRTC2Q53ET0 693 aaPredicted RBP8.82□□□□□ -1
GGA3-223ENST00000621870 CES4AQ5XG92 561 aa8.82□□□□□ -1
GGA3-223ENST00000621870 SLC25A24Q6NUK1 477 aa8.82□□□□□ -1
GGA3-223ENST00000621870 DNM1P34Q6PK57 102 aa8.82□□□□□ -1
GGA3-223ENST00000621870 ZNF550Q7Z398 422 aa8.82□□□□□ -1
GGA3-223ENST00000621870 PPP1R3BQ86XI6 285 aa8.82□□□□□ -1
GGA3-223ENST00000621870 KDM1BQ8NB78 822 aa8.82□□□□□ -1
GGA3-223ENST00000621870 AGBL5Q8NDL9 886 aa8.82□□□□□ -1
GGA3-223ENST00000621870 WDR60Q8WVS4 1066 aa8.82□□□□□ -1
GGA3-223ENST00000621870 G6PC3Q9BUM1 346 aa8.82□□□□□ -1
GGA3-223ENST00000621870 GPRC5BQ9NZH0 403 aa8.82□□□□□ -1
GGA3-223ENST00000621870 B4GALT7Q9UBV7 327 aa8.82□□□□□ -1
GGA3-223ENST00000621870 DDX60Q8IY21 1712 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 H0Y8X5 98 aa8.81□□□□□ -1
GGA3-223ENST00000621870 HOXC11O43248 304 aaPredicted RBP8.81□□□□□ -1
GGA3-223ENST00000621870 RNF13O43567 381 aa8.81□□□□□ -1
GGA3-223ENST00000621870 LYNP07948 512 aa8.81□□□□□ -1
GGA3-223ENST00000621870 HBQ1P09105 142 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ZNF888P0CJ79 500 aaPredicted RBP8.81□□□□□ -1
GGA3-223ENST00000621870 ADORA3P0DMS8 318 aa8.81□□□□□ -1
GGA3-223ENST00000621870 FPR1P21462 350 aa8.81□□□□□ -1
GGA3-223ENST00000621870 RORAP35398 523 aa8.81□□□□□ -1
GGA3-223ENST00000621870 PRLHRP49683 370 aa8.81□□□□□ -1
GGA3-223ENST00000621870 HK3P52790 923 aa8.81□□□□□ -1
GGA3-223ENST00000621870 PDX1P52945 283 aa8.81□□□□□ -1
GGA3-223ENST00000621870 FADDQ13158 208 aa8.81□□□□□ -1
GGA3-223ENST00000621870 TRAM2Q15035 370 aa8.81□□□□□ -1
GGA3-223ENST00000621870 B3GNT6Q6ZMB0 384 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ZNF534Q76KX8 674 aa8.81□□□□□ -1
GGA3-223ENST00000621870 HDDC2Q7Z4H3 204 aa8.81□□□□□ -1
GGA3-223ENST00000621870 LILRA3Q8N6C8 439 aaPredicted RBP8.81□□□□□ -1
GGA3-223ENST00000621870 NAXEQ8NCW5 288 aa8.81□□□□□ -1
GGA3-223ENST00000621870 SLC22A8Q8TCC7 542 aa8.81□□□□□ -1
GGA3-223ENST00000621870 C16orf78Q8WTQ4 265 aa8.81□□□□□ -1
GGA3-223ENST00000621870 THEM6Q8WUY1 208 aa8.81□□□□□ -1
GGA3-223ENST00000621870 TIMM29Q9BSF4 260 aa8.81□□□□□ -1
GGA3-223ENST00000621870 UCK2Q9BZX2 261 aa8.81□□□□□ -1
GGA3-223ENST00000621870 FAM192AQ9GZU8 254 aa8.81□□□□□ -1
GGA3-223ENST00000621870 IGSF5Q9NSI5 407 aa8.81□□□□□ -1
GGA3-223ENST00000621870 PAIP2BQ9ULR5 123 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 ZNF451Q9Y4E5 1061 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms