RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ZNF717Q9BY31 904 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 MRPL46Q9H2W6 279 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 ZBTB26Q9HCK0 441 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 KCNK9Q9NPC2 374 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 PCTPQ9UKL6 214 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 CLCA3PQ9Y6N3 262 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 PCNX1Q96RV3 2341 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 STX16-NPEPL1H3BU86 382 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 STX16O14662 325 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 NME2P1O60361 137 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 ITGA10O75578 1167 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 ZFAND5O76080 213 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 CLDN9O95484 217 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 SBK3P0C264 359 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 NME2P22392 152 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 PTX3P26022 381 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 CRHR1P34998 444 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 RAP1GDS1P52306 607 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 AGBL2Q5U5Z8 902 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 FJX1Q86VR8 437 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 OR4N5Q8IXE1 308 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 ZNF321PQ8N8H1 164 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 MZB1Q8WU39 189 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 MTFMTQ96DP5 389 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 APOPT1Q96IL0 206 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 TSPAN10Q9H1Z9 355 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 LIN28AQ9H9Z2 209 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 TMBIM4Q9HC24 238 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 ATG4BQ9Y4P1 393 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 SPACA6W5XKT8 324 aa16.71■□□□□ 0.27
SCAMP4-213ENST00000621748 EML6Q6ZMW3 1958 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 SYNDIG1LA6NDD5 238 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 FGF17O60258 216 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 TNNI3P19429 210 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 COL8A1P27658 744 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 BSGP35613 385 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 CCNG1P51959 295 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 HNRNPH2P55795 449 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 CUL3Q13618 768 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 SERTAD2Q14140 314 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 C18orf63Q68DL7 685 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 RPS27LQ71UM5 84 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 MAMDC2Q7Z304 686 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 GPR180Q86V85 440 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 ZCCHC7Q8N3Z6 543 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 MORN4Q8NDC4 146 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 OR14A16Q8NHC5 309 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 DAZLQ92904 295 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 RELTQ969Z4 430 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 ATP6V1E2Q96A05 226 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 REPS1Q96D71 796 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 CENPKQ9BS16 269 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 NTMT1Q9BV86 223 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 OR8D2Q9GZM6 311 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 PSD3Q9NYI0 1048 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 ACTL7BQ9Y614 415 aa16.7■□□□□ 0.26
SCAMP4-213ENST00000621748 A0A1B0GTL3 188 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 A0A1B0GUH1 482 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 WASHC1A8K0Z3 465 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 C17orf105B2RV13 164 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 FOXE1O00358 373 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 ZG16O60844 167 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 PRKRAO75569 313 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 ARL1P40616 181 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 ARFIP1P53367 373 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 PHEXP78562 749 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 IGLV3-21P80748 117 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 ALDH6A1Q02252 535 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 SLC18A2Q05940 514 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 ASPHQ12797 758 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 TRAF3Q13114 568 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 RNFT1Q5M7Z0 435 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 MRM1Q6IN84 353 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 MDGA2Q7Z553 956 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 SIAH3Q8IW03 269 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 TMEM156Q8N614 296 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 CPSF7Q8N684 471 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 TMEM125Q96AQ2 219 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 CCDC126Q96EE4 140 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 RPF2Q9H7B2 306 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 DDX31Q9H8H2 851 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 MS4A12Q9NXJ0 267 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 NKIRAS1Q9NYS0 192 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 YARS2Q9Y2Z4 477 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 ASB4Q9Y574 426 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 CACNA1DQ01668 2161 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 UNC79Q9P2D8 2635 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 CENPEQ02224 2701 aa16.69■□□□□ 0.26
SCAMP4-213ENST00000621748 A0A0A6YYD5 115 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 TRGV8A0A0C4DH27 118 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 A8MT66 165 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 FOXO6A8MYZ6 492 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 HMGB1P1B2RPK0 211 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 NPIPA5E9PKD4 350 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 PPP6CO00743 305 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 PROM1O43490 865 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 TMPRSS11DO60235 418 aa16.68■□□□□ 0.26
SCAMP4-213ENST00000621748 SPAG7O75391 227 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms