RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 IGHV4-34P06331 123 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 AFF3P51826 1226 aaKnown RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 PPP1CAP62136 330 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 IFI44LQ53G44 452 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ZC3H12BQ5HYM0 836 aaKnown RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 HLA-DQA1Q5Y7H0 255 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ZBTB46Q86UZ6 589 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 NRROSQ86YC3 692 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ARMC8Q8IUR7 673 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ARL14Q8N4G2 192 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ARL10Q8N8L6 244 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 OR9A2Q8NGT5 310 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 OR9A4Q8NGU2 314 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 GAL3ST4Q96RP7 486 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 SLC6A20Q9NP91 592 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 GIN1Q9NXP7 522 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 LOC105369274A0A096LPK9 316 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 LOC102723532A0A0G2JNH3 316 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 C1orf226A1L170 272 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 LRIT2A6NDA9 550 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 PGRMC2O15173 223 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 UQCRC2P22695 453 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 CCR5P51681 352 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ENPP2Q13822 863 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 LAS2Q8IYD9 372 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 OR4N4Q8N0Y3 316 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 SYNPOQ8N3V7 929 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 TM4SF18Q96CE8 201 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 TRIM4Q9C037 500 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 PNO1Q9NRX1 252 aaKnown RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 DNAAF2Q9NVR5 837 aaKnown RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 PHF11Q9UIL8 331 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 NAALAD2Q9Y3Q0 740 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 A0A1B0GTW7 788 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 PLOD2O00469 737 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 OR6B1O95007 311 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 BCKDHBP21953 392 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 AVPR1BP47901 424 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 MERTKQ12866 999 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 BNIP3Q12983 259 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 COX20Q5RI15 118 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 MFSD2AQ8NA29 543 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 LRRC61Q9BV99 259 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 SLC9A8Q9Y2E8 581 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 CKAP5Q14008 2032 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 THRBP10828 461 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 ZFP36L2P47974 494 aaKnown RBP14.91□□□□□ -0.02
CPSF1-213ENST00000620219 CDK9P50750 372 aaKnown RBP14.91□□□□□ -0.02
CPSF1-213ENST00000620219 GAB1Q13480 694 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 PARP8Q8N3A8 854 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF548Q8NEK5 533 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-213ENST00000620219 OR51I1Q9H343 314 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 TRPV5Q9NQA5 729 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 TMEM265A0A087WTH1 108 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 ATP5A1P25705 553 aaKnown RBP14.91□□□□□ -0.02
CPSF1-213ENST00000620219 MC3RP41968 323 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 GAS6Q14393 721 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 MSRB3Q8IXL7 192 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 COX18Q8N8Q8 333 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 ZDHHC12Q96GR4 267 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 CPPED1Q9BRF8 314 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-213ENST00000620219 SERPINI2O75830 405 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 OR2B3O76000 313 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 PDE9AO76083 593 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 SEMA3DO95025 777 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 AIFM1O95831 613 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 IGFBP5P24593 272 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 ATP6V1E1P36543 226 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 PUS10Q3MIT2 529 aaKnown RBP14.91□□□□□ -0.02
CPSF1-213ENST00000620219 ANKRD34AQ69YU3 496 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 OR8J2Q8NGG1 315 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 OR5T3Q8NGG3 340 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 FNDC11Q9BVV2 318 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 PCDHGA4Q9Y5G9 962 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 SLCO1B1Q9Y6L6 691 aa14.91□□□□□ -0.02
CPSF1-213ENST00000620219 IL7RP16871 459 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 MCATQ8IVS2 390 aaKnown RBP14.9□□□□□ -0.02
CPSF1-213ENST00000620219 SDR16C5Q8N3Y7 309 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 TMCO5AQ8N6Q1 288 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 NUP43Q8NFH3 380 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 FSCN3Q9NQT6 498 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 SELENONQ9NZV5 590 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 ENTPD2Q9Y5L3 495 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 GMPPBQ9Y5P6 360 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 FAM220BPB1ANY3 271 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 RNASET2O00584 256 aaKnown RBP14.9□□□□□ -0.02
CPSF1-213ENST00000620219 NUDT14O95848 222 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 ST6GAL1P15907 406 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 CRISP3P54108 245 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 MAT1AQ00266 395 aaKnown RBP14.9□□□□□ -0.02
CPSF1-213ENST00000620219 EIF2B5Q13144 721 aaKnown RBP14.9□□□□□ -0.02
CPSF1-213ENST00000620219 LEXMQ3ZCV2 418 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 C8orf59Q8N0T1 100 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-213ENST00000620219 C10orf53Q8N6V4 93 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF26P17031 533 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF267Q14586 743 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-213ENST00000620219 C6orf132Q5T0Z8 1188 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 OR2T5Q6IEZ7 315 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 ABHD17CQ6PCB6 329 aa14.9□□□□□ -0.02
CPSF1-213ENST00000620219 OR2T29Q8NH02 315 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms