RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 L3HYPDHQ96EM0 354 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SMIM10Q96HG1 83 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 KCNA7Q96RP8 456 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 AIF1LQ9BQI0 150 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 EBF4Q9BQW3 602 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TMUB1Q9BVT8 246 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SORBS1Q9BX66 1292 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 OSBPL11Q9BXB4 747 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ERVK-6Q9BXR3 956 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MRPS26Q9BYN8 205 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TRIM15Q9C019 465 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TRIM4Q9C037 500 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SLC6A16Q9GZN6 736 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 RHBGQ9H310 441 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 EHD1Q9H4M9 534 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF696Q9H7X3 374 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 NT5DC2Q9H857 520 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF395Q9H8N7 513 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 IPPKQ9H8X2 491 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TIMMDC1Q9NPL8 285 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SEMA4BQ9NPR2 832 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 FARSBQ9NSD9 589 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 CUTCQ9NTM9 273 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 PNPOQ9NVS9 261 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 GID8Q9NWU2 228 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 IFT80Q9P2H3 777 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 OPTCQ9UBM4 332 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SUCOQ9UBS9 1254 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 CTSFQ9UBX1 484 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MAN2B2Q9Y2E5 1009 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 AP3M1Q9Y2T2 418 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 NDUFAF1Q9Y375 327 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 BOLA1Q9Y3E2 137 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF451Q9Y4E5 1061 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 HEMK1Q9Y5R4 338 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SLC22A7Q9Y694 548 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MAU2Q9Y6X3 613 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ADGRG4Q8IZF6 3080 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 HECTD1Q9ULT8 2610 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 DOCK10Q96BY6 2186 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 A0A0A6YYC8 382 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 LOC100653049A0A140TA62 436 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 BLACEA4D250 179 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 LRIT2A6NDA9 550 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OR2W5A6NFC9 320 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 VSTM2BA6NLU5 285 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 AQP12BA6NM10 295 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 I3L1I5 382 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SGK494L7N484 410 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MASP2O00187 686 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 RTCAO00442 366 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 NKX2-8O15522 239 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 NDUFS4O43181 175 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 HNRNPRO43390 633 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SUV39H1O43463 412 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 DNAJA2O60884 412 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 KATNA1O75449 491 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 RDH16O75452 317 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 JRKO75564 520 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CLEC3AO75596 197 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 KLF7O75840 302 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 KRT34O76011 436 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OR4F21O95013 312 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CLPTM1O96005 669 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SERPIND1P05546 499 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CHRNGP07510 517 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 UMODP07911 640 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 FAM58BPP0C7Q3 252 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SLC35G6P0C7Q6 338 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF888P0CJ79 500 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 FCGR1AP12314 374 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 EPB42P16452 691 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 IL1RNP18510 177 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF10P21506 573 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 PIK3R1P27986 724 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 GSTT1P30711 240 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CASRP41180 1078 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 HNF4AP41235 474 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 FOLR3P41439 243 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 TSFMP43897 325 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 NAGLUP54802 743 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SESN3P58005 492 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OLR1P78380 273 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SLC25A3Q00325 362 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CLCQ05315 142 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 KLRB1Q12918 225 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 AIMP2Q13155 320 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CUL3Q13618 768 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 IL10RAQ13651 578 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 FLOT2Q14254 428 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 PDK3Q15120 406 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 TRIP10Q15642 601 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CPSF6Q16630 551 aaKnown RBP eCLIP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ADPRMQ3LIE5 342 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 LSM12Q3MHD2 195 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 LINC00303Q3SY05 128 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ARL13AQ5H913 290 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 TOR1AIP1Q5JTV8 583 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SAMD4BQ5PRF9 694 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 GRHL2Q6ISB3 625 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms