RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 EHD1Q9H4M9 534 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 L2HGDHQ9H9P8 463 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 GPRC5BQ9NZH0 403 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 MARCH4Q9P2E8 410 aaPredicted RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 FBXW2Q9UKT8 454 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 IQCF5A8MTL0 148 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 KLF4O43474 513 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 SPOPO43791 374 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 AKR1B10O60218 316 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 CLEC3AO75596 197 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 ALDOAP04075 364 aaKnown RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 NPPBP16860 134 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 ARNTP27540 789 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 SERPINB3P29508 390 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 CETN2P41208 172 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 RPL21P46778 160 aaKnown RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 BTG2P78543 158 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 HECTD2Q5U5R9 776 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 UGT3A1Q6NUS8 523 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 IL20RBQ6UXL0 311 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 ZNF704Q6ZNC4 412 aaPredicted RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 OR5T3Q8NGG3 340 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 ZCCHC10Q8TBK6 192 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 SLC2A12Q8TD20 617 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 REPS1Q96D71 796 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 WFIKKN1Q96NZ8 548 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 CNPPD1Q9BV87 410 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 OSBPL8Q9BZF1 889 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 HHATLQ9HCP6 504 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 FANCFQ9NPI8 374 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 WWOXQ9NZC7 414 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 COPS7AQ9UBW8 275 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 SLC2A6Q9UGQ3 507 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 CORO1CQ9ULV4 474 aaPredicted RBP4.17□□□□□ -1.74
SNCA-213ENST00000618500 SOX13Q9UN79 622 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 TSC22D4Q9Y3Q8 395 aa4.17□□□□□ -1.74
SNCA-213ENST00000618500 TP53I11O14683 189 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 NDUFS4O43181 175 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 DANCRP0C864 163 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TPSB2P20231 275 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 DNASE1L1P49184 302 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 NR0B1P51843 470 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 GFRA1P56159 465 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 EEFSECP57772 596 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 SQLEQ14534 574 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TPSAB1Q15661 275 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 GLYR1Q49A26 553 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 NEPROQ6NW34 567 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 AMER2Q8N7J2 671 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 PRELID2Q8N945 189 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 OR8K1Q8NGG5 319 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 ABTB1Q969K4 478 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 PIK3IP1Q96FE7 263 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 PDLIM5Q96HC4 596 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 FBXL20Q96IG2 436 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 RHBGQ9H310 441 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 EXO5Q9H790 373 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 PARVBQ9HBI1 364 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 YAE1D1Q9NRH1 226 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 MED16Q9Y2X0 877 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 MXRA5Q9NR99 2828 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 CLPSP04118 112 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 RFPL3SP0C7P2 107 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 CDH1P12830 882 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TNNT1P13805 278 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 ZNF708P17019 499 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TMED10P49755 219 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 GZMKP49863 264 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 SPARCL1Q14515 664 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 PDCD2Q16342 344 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 CDKL4Q5MAI5 379 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 FNDC7Q5VTL7 733 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TIGD3Q6B0B8 471 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 CYB5R2Q6BCY4 276 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 DRICH1Q6PGQ1 229 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 AGTRAPQ6RW13 159 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 ZNF793Q6ZN11 406 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 BTLAQ7Z6A9 289 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 CILP2Q8IUL8 1156 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 REXO1L1PQ8IX06 675 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TAGAPQ8N103 731 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 PLPP7Q8NBV4 271 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 BBOF1Q8ND07 529 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 OR52K1Q8NGK4 314 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 GIMAP7Q8NHV1 300 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 CD200R1Q8TD46 325 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 SLC5A11Q8WWX8 675 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 STARD4Q96DR4 205 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 CAPZA3Q96KX2 299 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 NAP1L5Q96NT1 182 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 TUBA1CQ9BQE3 449 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 AIF1LQ9BQI0 150 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TRAF4Q9BUZ4 470 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 PLA2G12AQ9BZM1 189 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 AICDAQ9GZX7 198 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 MYOZ1Q9NP98 299 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 SEMA4BQ9NPR2 832 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 ARMCX1Q9P291 453 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 SH2B3Q9UQQ2 575 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms