RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CCDC153Q494R4 210 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 TCHHL1Q5QJ38 904 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 TUBA3EQ6PEY2 450 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 RPS19BP1Q86WX3 136 aaKnown RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 OR4N5Q8IXE1 308 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 RIBC1Q8N443 379 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 CCNYL1Q8N7R7 359 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 OR14A16Q8NHC5 309 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 GRHL3Q8TE85 626 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 THAP3Q8WTV1 239 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 CAVIN3Q969G5 261 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 CCDC126Q96EE4 140 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 C5orf34Q96MH7 638 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 UTP23Q9BRU9 249 aaKnown RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 C12orf65Q9H3J6 166 aaKnown RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 CDCP1Q9H5V8 836 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 RPF2Q9H7B2 306 aaKnown RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 DDX31Q9H8H2 851 aaKnown RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 AGPAT4Q9NRZ5 378 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 PSD3Q9NYI0 1048 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 ZNF223Q9UK11 482 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 STK38LQ9Y2H1 464 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 CLCA3PQ9Y6N3 262 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 C2CD3Q4AC94 2353 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 G3V2L1 256 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 PRAMEF2O60811 474 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 AIFM1O95831 613 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 FAM58BPP0C7Q3 252 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 TPP2P29144 1249 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-228ENST00000618469 HMOX2P30519 316 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 CRHR1P34998 444 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 OC90Q02509 493 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-228ENST00000618469 FOLH1Q04609 750 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 OR1C1Q15619 314 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 INAQ16352 499 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 MRM1Q6IN84 353 aaKnown RBP14.9□□□□□ -0.02
BRCA1-228ENST00000618469 TMEM132CQ8N3T6 1108 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 MYRIPQ8NFW9 859 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 SREK1Q8WXA9 508 aaKnown RBP14.9□□□□□ -0.02
BRCA1-228ENST00000618469 DAZLQ92904 295 aaKnown RBP14.9□□□□□ -0.02
BRCA1-228ENST00000618469 ANKRD9Q96BM1 317 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-228ENST00000618469 APOPT1Q96IL0 206 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 SIGLEC12Q96PQ1 595 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 OR8D2Q9GZM6 311 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 GSTO2Q9H4Y5 243 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 WDR41Q9HAD4 459 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 VTI1BQ9UEU0 232 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 GRID1Q9ULK0 1009 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 PPIEQ9UNP9 301 aaKnown RBP14.9□□□□□ -0.02
BRCA1-228ENST00000618469 ASB4Q9Y574 426 aa14.9□□□□□ -0.02
BRCA1-228ENST00000618469 FBN2P35556 2912 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 GLOD5A6NK44 160 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 C17orf105B2RV13 164 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 MANBAO00462 879 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 FCHO1O14526 889 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 CBX6O95503 412 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 KRT6AP02538 564 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 KRT6BP04259 564 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 KLK1P06870 262 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 COX7A2P14406 83 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 TNNI3P19429 210 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 KRT6CP48668 564 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 HTR6P50406 440 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 MLF1P58340 268 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 IGLV3-21P80748 117 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-228ENST00000618469 PLIN5Q00G26 463 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 ZNF766Q5HY98 468 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 RPUSD3Q6P087 351 aaKnown RBP14.89□□□□□ -0.03
BRCA1-228ENST00000618469 PAGE2Q7Z2X7 111 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 COMMD6Q7Z4G1 85 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 METTL4Q8N3J2 472 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 BCORP1Q8N888 145 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 MDS2Q8NDY4 140 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 RDH11Q8TC12 318 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 DGAT2Q96PD7 388 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 PARD6BQ9BYG5 372 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 IQCGQ9H095 443 aaKnown RBP14.89□□□□□ -0.03
BRCA1-228ENST00000618469 BRF2Q9HAW0 419 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 TEX10Q9NXF1 929 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-228ENST00000618469 AHSPQ9NZD4 102 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 LGALS13Q9UHV8 139 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 MID2Q9UJV3 735 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 SLC5A6Q9Y289 635 aa14.89□□□□□ -0.03
BRCA1-228ENST00000618469 A0A1W2PR48 441 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 PROM1O43490 865 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 ENO1P06733 434 aaKnown RBP14.88□□□□□ -0.03
BRCA1-228ENST00000618469 GRNP28799 593 aaKnown RBP14.88□□□□□ -0.03
BRCA1-228ENST00000618469 CD96P40200 585 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 STT3AP46977 705 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 PKNOX1P55347 436 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 PMP22Q01453 160 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 SLC18A2Q05940 514 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 CSTF3Q12996 717 aaKnown RBP14.88□□□□□ -0.03
BRCA1-228ENST00000618469 ZNF468Q5VIY5 522 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-228ENST00000618469 OR52E8Q6IFG1 317 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 TRABD2AQ86V40 505 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 MORN4Q8NDC4 146 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 METTL6Q8TCB7 284 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 SLC2A12Q8TD20 617 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 AGAP11Q8TF27 550 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms