RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 RBMS2Q15434 407 aaKnown RBP7.09□□□□□ -1.28
PDE6A-205ENST00000617647 GTDC1Q4AE62 458 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 CARD16Q5EG05 197 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 C6orf136Q5SQH8 315 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 NCBP2-AS2Q69YL0 99 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 PLAG1Q6DJT9 500 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 MTFR2Q6P444 385 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 PLEKHH3Q7Z736 793 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 KIAA0907Q7Z7F0 614 aaPredicted RBP7.09□□□□□ -1.28
PDE6A-205ENST00000617647 TMEM135Q86UB9 458 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 CCDC71Q8IV32 467 aaPredicted RBP7.09□□□□□ -1.28
PDE6A-205ENST00000617647 C11orf65Q8NCR3 313 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 BPIFCQ8NFQ6 507 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 OR52P1PQ8NH57 321 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 SPATA22Q8NHS9 363 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 KIAA1143Q96AT1 154 aaPredicted RBP7.09□□□□□ -1.28
PDE6A-205ENST00000617647 PDXPQ96GD0 296 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 HPDLQ96IR7 371 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 ESRP2Q9H6T0 727 aaKnown RBP7.09□□□□□ -1.28
PDE6A-205ENST00000617647 MTMR10Q9NXD2 777 aa7.09□□□□□ -1.28
PDE6A-205ENST00000617647 AGO1Q9UL18 857 aaKnown RBP7.09□□□□□ -1.28
PDE6A-205ENST00000617647 A0A0B4J293 547 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 LOC285095A0A1B0GVY8 99 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 TLR4O00206 839 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 GFRA2O00451 464 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SEPT4O43236 478 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SNAPC5O75971 98 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 RAB3DO95716 219 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 MT-CYBP00156 380 aaPredicted RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 MT-ND4P03905 459 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SDHBP21912 280 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 PTPN3P26045 913 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 TNFSF9P41273 254 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CRATP43155 626 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 MAGEA3P43357 314 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CRKLP46109 303 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 TWF1Q12792 350 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 HTR4Q13639 388 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 GANABQ14697 944 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 PTGR1Q14914 329 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 VMACQ2NL98 169 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 IER5Q5VY09 327 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 OLFML2AQ68BL7 652 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 RAET1GQ6H3X3 334 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 ZFAND4Q86XD8 727 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 RNF31Q96EP0 1072 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 S100A13Q99584 98 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SEMA4CQ9C0C4 833 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 PRO1933Q9H354 126 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 NMUR1Q9HB89 426 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 DCAF13Q9NV06 445 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SLC2A6Q9UGQ3 507 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 ACSL6Q9UKU0 697 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 GPR45Q9Y5Y3 372 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 AP1M2Q9Y6Q5 423 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 LOC100509620A0A075B734 347 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 IQCMA0A1B0GVH7 501 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 ABHD14A-ACY1A0A1B0GW23 586 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CREBL2O60519 120 aaPredicted RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SOX30O94993 753 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SOX14O95416 240 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 MPC2O95563 127 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SRPRAP08240 638 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 NME1P15531 152 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 GJA1P17302 382 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CXCL3P19876 107 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CCR6P51684 374 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CLCN3P51790 818 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SOX4Q06945 474 aaPredicted RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 ZNF235Q14590 738 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 TTLL4Q14679 1199 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SFRP5Q5T4F7 317 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 OTUD1Q5VV17 481 aaPredicted RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SLC39A4Q6P5W5 647 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 C4orf19Q8IY42 314 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 OR2T11Q8NH01 316 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 EEF1AKMT1Q8WVE0 214 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 RAB7BQ96AH8 199 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 TRMT2BQ96GJ1 504 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 TEX37Q96LM6 180 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 MARVELD1Q9BSK0 173 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SLC38A1Q9H2H9 487 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 FN3KQ9H479 309 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 GORASP2Q9H8Y8 452 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 KCNIP3Q9Y2W7 256 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CFAP20Q9Y6A4 193 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 PLCH1Q4KWH8 1693 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 UPK1AO00322 258 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 ABCD4O14678 606 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 CRTAPO75718 401 aaPredicted RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 OPN1SWP03999 348 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SERPIND1P05546 499 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 ACAA1P09110 424 aaPredicted RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SBK2P0C263 348 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 C6P13671 934 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 SOAT1P35610 550 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 AP3S2P59780 193 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 UBE2IP63279 158 aaKnown RBP7.08□□□□□ -1.28
PDE6A-205ENST00000617647 PITPNAQ00169 270 aa7.08□□□□□ -1.28
PDE6A-205ENST00000617647 PLA2G7Q13093 441 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms