RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GABPB1Q06547 395 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 CAMKMTQ7Z624 323 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 TMEM139Q8IV31 216 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OR6Y1Q8NGX8 325 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ELP5Q8TE02 316 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ZNF845Q96IR2 970 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 MENTQ9BUN1 341 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MED4Q9NPJ6 270 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 KLHL9Q9P2J3 617 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 FBXL17Q9UF56 701 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 APOC4-APOC2K7ER74 178 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 APOC2P02655 101 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 PTGER3P43115 390 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 PARP6Q2NL67 630 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 KRTCAP3Q53RY4 240 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 TRIM68Q6AZZ1 485 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ZNF595Q8IYB9 648 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OR4E2Q8NGC2 313 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 PLEKHF1Q96S99 279 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OSBPL8Q9BZF1 889 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OR8D2Q9GZM6 311 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ERRFI1Q9UJM3 462 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 COPS3Q9UNS2 423 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 SCO2O43819 266 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 POU3F3P20264 500 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 CRYMQ14894 314 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MTX3Q5HYI7 312 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 C1orf189Q5VU69 101 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ZNF589Q86UQ0 364 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 SULF2Q8IWU5 870 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MUC15Q8N387 334 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 TANKQ92844 425 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 SLC24A2Q9UI40 661 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 DENND4CQ5VZ89 1909 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MEIOCA2RUB1 952 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 I6L893 689 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 FAM155BO75949 473 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ZNF682O95780 498 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 FCGR1AP12314 374 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 CDKN1CP49918 316 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 SMIM15Q7Z3B0 74 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 PDZD3Q86UT5 571 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 KYQ8NBH2 561 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 KISS1RQ969F8 398 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 DUS3LQ96G46 650 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 TBC1D23Q9NUY8 699 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 INTS9Q9NV88 658 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 CLIC4Q9Y696 253 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 CSNK1G3Q9Y6M4 447 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 C9orf172C9J069 976 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 TRDMT1O14717 391 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 WDR1O75083 606 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 TGDSO95455 350 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 RHOXF2BP0C7M4 288 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 NMBRP28336 390 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 DAP3P51398 398 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 TMEM71Q6P5X7 295 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ASCL5Q7RTU5 278 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OR4N5Q8IXE1 308 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MVB12AQ96EY5 273 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 PGAP3Q96FM1 320 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 CELF6Q96J87 481 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 RHOXF2Q9BQY4 288 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 NTMT1Q9BV86 223 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 SMYD3Q9H7B4 428 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 PRDM9Q9NQV7 894 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 P2RX2Q9UBL9 471 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MRPS7Q9Y2R9 242 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 C5orf67F2Z3F1 127 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ERI3O43414 337 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 ENSAO43768 121 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 CLDN9O95484 217 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 METTL18O95568 372 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 GALCP54803 685 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 DPCR1Q3MIW9 517 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 LIN52Q52LA3 116 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 DNAJC14Q6Y2X3 702 aaPredicted RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 STEAP2Q8NFT2 490 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 SORCS1Q8WY21 1168 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 NSL1Q96IY1 281 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ORAI3Q9BRQ5 295 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 GJB4Q9NTQ9 266 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OR4F21O95013 312 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 EGFP01133 1207 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 LBPP18428 481 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 CASP8Q14790 479 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MYLK3Q32MK0 819 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 MS4A13Q5J8X5 152 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OR4F3Q6IEY1 312 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 OR7E24Q6IFN5 339 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ZNF565Q8N9K5 539 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 PPP1R13LQ8WUF5 828 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 GLYATL1Q969I3 302 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 ISG20Q96AZ6 181 aaKnown RBP3.2□□□□□ -1.9
LPP-220ENST00000617246 FOXQ1Q9C009 403 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 SEC61A2Q9H9S3 476 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 TNFRSF10DQ9UBN6 386 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 RIIAD1A6NNX1 92 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 HHLA1C9JL84 531 aa3.2□□□□□ -1.9
LPP-220ENST00000617246 EBAG9O00559 213 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms