RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CXorf57Q6NSI4 855 aaKnown RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 FAM122CQ6P4D5 195 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 ARSKQ6UWY0 536 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 TMPRSS11BQ86T26 416 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SLC30A8Q8IWU4 369 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 FAM9CQ8IZT9 166 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 LILRA3Q8N6C8 439 aaPredicted RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 GPR26Q8NDV2 337 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 FAM46DQ8NEK8 389 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CSGALNACT1Q8TDX6 532 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 ZNF431Q8TF32 576 aaPredicted RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 TESCQ96BS2 214 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 REPS1Q96D71 796 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 GON7Q9BXV9 100 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 ERVMER34-1Q9H9K5 563 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 C3orf14Q9HBI5 128 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 GLTPQ9NZD2 209 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 LEUTXA8MZ59 168 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 LYRM1O43325 122 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 MYL12AP19105 171 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 AOAHP28039 575 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CD79BP40259 229 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 GATMP50440 423 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 RPS13P62277 151 aaKnown RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 MAB21L1Q13394 359 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SLC5A12Q1EHB4 618 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 GPRC6AQ5T6X5 926 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 BRAT1Q6PJG6 821 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 GLB1LQ6UWU2 654 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 C11orf96Q7Z7L8 435 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 MYLIPQ8WY64 445 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SLC9A6Q92581 669 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 MRPS31Q92665 395 aaKnown RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 PRR14Q9BWN1 585 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SEC14L4Q9UDX3 406 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CACNA1CQ13936 2221 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 MYO16Q9Y6X6 1858 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 ZNF670-ZNF695F2Z2N8 137 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 SCN2BO60939 215 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 IFNW1P05000 195 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 BCHEP06276 602 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 CR2P20023 1033 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 CD22P20273 847 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 ETV5P41161 510 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 ETV6P41212 452 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 PREPP48147 710 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 ETV1P50549 477 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 RBBP4Q09028 425 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 C2orf80Q0P641 193 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 MAP4K2Q12851 820 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 FCN2Q15485 313 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 IDO2Q6ZQW0 420 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 VN1R5Q7Z5H4 357 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 C9orf43Q8TAL5 461 aaPredicted RBP12.55□□□□□ -0.4
MSH6-214ENST00000616033 RAET1EQ8TD07 263 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 CREB3L4Q8TEY5 395 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 PIGKQ92643 395 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 KCTD7Q96MP8 289 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 SAMD11Q96NU1 681 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 TBX5Q99593 518 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 TMEM45AQ9NWC5 275 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 SPATA2Q9UM82 520 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 A0A075B6Q4 140 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 M0QZQ0 153 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 SIGLEC5O15389 551 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 HRGP04196 525 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 ELNP15502 786 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 ARSBP15848 533 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 GABRB1P18505 474 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 ACRV1P26436 265 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 TAGLNQ01995 201 aaKnown RBP12.55□□□□□ -0.4
MSH6-214ENST00000616033 SIGLEC14Q08ET2 396 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 PIN1Q13526 163 aaPredicted RBP12.55□□□□□ -0.4
MSH6-214ENST00000616033 EIF4HQ15056 248 aaKnown RBP12.55□□□□□ -0.4
MSH6-214ENST00000616033 MZT2BQ6NZ67 158 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 CERS6Q6ZMG9 384 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 LRR1Q96L50 414 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 C1QTNF7Q9BXJ2 289 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 B3GAT2Q9NPZ5 323 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 MYO7AQ13402 2215 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 MRPS14O60783 128 aaKnown RBP12.55□□□□□ -0.4
MSH6-214ENST00000616033 GJA1P17302 382 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 CELP19835 753 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 EIF2B5Q13144 721 aaKnown RBP12.55□□□□□ -0.4
MSH6-214ENST00000616033 CRHR2Q13324 411 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 TOR1AIP1Q5JTV8 583 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 IDNKQ5T6J7 187 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 XKRXQ6PP77 449 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 TMEM145Q8NBT3 493 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 WFDC5Q8TCV5 224 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 SCAMP4Q969E2 229 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 PIP5K1AQ99755 562 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 GPR62Q9BZJ7 368 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 MRPL39Q9NYK5 338 aaKnown RBP12.55□□□□□ -0.4
MSH6-214ENST00000616033 MAPRE3Q9UPY8 281 aa12.55□□□□□ -0.4
MSH6-214ENST00000616033 DVL2O14641 736 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 HRO43593 1189 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 PROS1P07225 676 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms