RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 DOCK6Q96HP0 2047 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KMOO15229 486 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ANXA4P09525 319 aaPredicted RBP10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ZNF8P17098 575 aaPredicted RBP10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PRKACBP22694 351 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CD6P30203 668 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FEN1P39748 380 aaKnown RBP10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 HMGA2P52926 109 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TBPL1P62380 186 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CCSMST1Q4G0I0 132 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PXDC1Q5TGL8 231 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ABI3BPQ7Z7G0 1075 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PDZD3Q86UT5 571 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GHDCQ8N2G8 530 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR4K1Q8NGD4 311 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC5A11Q8WWX8 675 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PMEPA1Q969W9 287 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ASB16Q96NS5 453 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PCBD2Q9H0N5 130 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GDE1Q9NZC3 331 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CXXC1Q9P0U4 656 aaPredicted RBP10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC6A14Q9UN76 642 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DYRK1BQ9Y463 629 aa10.35□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC35F4A4IF30 521 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SAGE2PA6NJ88 616 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 LRRTM2O43300 516 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KIAA0513O60268 411 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PCDHGA12O60330 932 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KCNJ13O60928 360 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GCM2O75603 506 aaPredicted RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PDHA2P29803 388 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 BDKRB1P46663 353 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SELENOWP63302 87 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GANABQ14697 944 aaKnown RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MLC1Q15049 377 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 LRRC73Q5JTD7 316 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C1orf52Q8N6N3 182 aaKnown RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SORCS1Q8WY21 1168 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ZNF300Q96RE9 604 aaPredicted RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DOHHQ9BU89 302 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MENTQ9BUN1 341 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PLCXD1Q9NUJ7 323 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ADAM29Q9UKF5 820 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 HSPB11Q9Y547 144 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PRR19A6NJB7 356 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PRRT4C9JH25 899 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TSPAN4O14817 238 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C6P13671 934 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KELP23276 732 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CAV3P56539 151 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 AGAP6Q5VW22 663 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FAM131AQ6UXB0 335 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 RAB43Q86YS6 212 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CYP4Z2PQ8N1L4 340 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EFHD2Q96C19 240 aaPredicted RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 AGAP4Q96P64 663 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SP140LQ9H930 580 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 THAP10Q9P2Z0 257 aaPredicted RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FZD4Q9ULV1 537 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ITM2BQ9Y287 266 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MRPS23Q9Y3D9 190 aaKnown RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C2orf16Q68DN1 1984 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PIPSLA2A3N6 862 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TEX46H3BTG2 121 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NUPL2O15504 423 aaKnown RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C9P02748 559 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EIF2S1P05198 315 aaKnown RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SOX3P41225 446 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MLLT3P42568 568 aaPredicted RBP10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PREPP48147 710 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR4C15Q8NGM1 316 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GPR151Q8TDV0 419 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NXPE3Q969Y0 559 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MAP6Q96JE9 813 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR5M11Q96RB7 305 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ITPAQ9BY32 194 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 REEP1Q9H902 201 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MUTYHQ9UIF7 546 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PCDHGB3Q9Y5G1 929 aa10.34□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 A0A1B0GVC2 190 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 A6NIN4 97 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 PCDH7O60245 1069 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 PTHP01270 115 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 ATF4P18848 351 aaPredicted RBP10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 LIMS1P48059 325 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 PCBP3P57721 371 aaKnown RBP10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 TRA2BP62995 288 aaKnown RBP10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 NTHL1P78549 312 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 VLDLRP98155 873 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 IRF3Q14653 427 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 ZNF438Q7Z4V0 828 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 BCDIN3DQ7Z5W3 292 aaKnown RBP10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 C11orf65Q8NCR3 313 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 WDR36Q8NI36 951 aaKnown RBP10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 IPCEF1Q8WWN9 437 aaPredicted RBP10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 SMARCD2Q92925 531 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 CCNB1IP1Q9NPC3 277 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 C1GALT1Q9NS00 363 aa10.33□□□□□ -0.76
SENP3-EIF4A1-201ENST00000614237 GPATCH2Q9NW75 528 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms