RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 BCKDHAP12694 445 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 F8A1P23610 371 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 SLC9A3P48764 834 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 MLLT10P55197 1068 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 ALG10Q5BKT4 473 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 RPL13AP3Q6NVV1 102 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 ASB18Q6ZVZ8 466 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 ITGB1BP2Q9UKP3 347 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 RFPL1O75677 317 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 IL1RNP18510 177 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 PRKACGP22612 351 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 DLX2Q07687 328 aaPredicted RBP19.32■□□□□ 0.68
CTDP1-208ENST00000613122 UNC50Q53HI1 259 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 PYHIN1Q6K0P9 492 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 HSPA12BQ96MM6 686 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 APOOQ9BUR5 198 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 CCDC59Q9P031 241 aaKnown RBP19.32■□□□□ 0.68
CTDP1-208ENST00000613122 MECP2P51608 486 aaKnown RBP19.32■□□□□ 0.68
CTDP1-208ENST00000613122 EIF5AP63241 154 aaKnown RBP19.32■□□□□ 0.68
CTDP1-208ENST00000613122 Q6ZSR6 202 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 PAQR7Q86WK9 346 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 RELL1Q8IUW5 271 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 KLHDC8AQ8IYD2 350 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 SLC7A11Q9UPY5 501 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 GPR89AB7ZAQ6 455 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 SEC14L5O43304 696 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 CLPXO76031 633 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 GPR89BP0CG08 455 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 ZNF16P17020 682 aaPredicted RBP19.31■□□□□ 0.68
CTDP1-208ENST00000613122 RHDQ02161 417 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 LRP8Q14114 963 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 ABRAXAS2Q15018 415 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 NR0B2Q15466 257 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 RTL10Q7L3V2 364 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 ARFGEF2Q9Y6D5 1785 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 FAAHO00519 579 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 HERV-K104P61576 105 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 MEDAGQ5VYS4 303 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 NANOGP8Q6NSW7 305 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 C6orf120Q7Z4R8 191 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 TREML1Q86YW5 311 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 OR4N5Q8IXE1 308 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 SLC44A3Q8N4M1 653 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 ZFYVE21Q9BQ24 234 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 NANOGQ9H9S0 305 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 TRNAU1APQ9NX07 287 aaKnown RBP19.31■□□□□ 0.68
CTDP1-208ENST00000613122 VNN3Q9NY84 501 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 PLOD2O00469 737 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 GINS1Q14691 196 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 SEC23BQ15437 767 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 ABHD17BQ5VST6 288 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 PLEKHG7Q6ZR37 379 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 DNAJA3Q96EY1 480 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 HS6ST2Q96MM7 605 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 PKP2Q99959 881 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 TTTY10Q9BZA0 68 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 PVALBP20472 110 aaPredicted RBP19.31■□□□□ 0.68
CTDP1-208ENST00000613122 RBM34P42696 430 aaKnown RBP19.31■□□□□ 0.68
CTDP1-208ENST00000613122 SLC36A3Q495N2 470 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 CHCHD4Q8N4Q1 142 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 SPERTQ8NA61 448 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 ECH1Q13011 328 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 NPWQ8N729 165 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 HORMAD2Q8N7B1 307 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 OR5T2Q8NGG2 359 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 AURKBQ96GD4 344 aaPredicted RBP19.31■□□□□ 0.68
CTDP1-208ENST00000613122 FAM129BQ96TA1 746 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 EPHA6Q9UF33 1036 aa19.31■□□□□ 0.68
CTDP1-208ENST00000613122 MYH2Q9UKX2 1941 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 A8MVJ9 347 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 RTCAO00442 366 aaKnown RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 SCGB1D2O95969 90 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 MRPL3P09001 348 aaKnown RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 DEFB133Q30KQ1 61 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 DEFB110Q30KQ9 67 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 UGT3A2Q3SY77 523 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 PM20D1Q6GTS8 502 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 BMFQ96LC9 184 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 HPF1Q9NWY4 346 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 C1orf220Q5T0J3 134 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 KIAA0895LQ68EN5 471 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 SHQ1Q6PI26 577 aaKnown RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 OR2T33Q8NG76 320 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 DOK4Q8TEW6 326 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 GAL3ST3Q96A11 431 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 PELI2Q9HAT8 420 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 H3BUI4 141 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 PXNP49023 591 aaPredicted RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 LAPTM4AQ15012 233 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 ERI1Q8IV48 349 aaKnown RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 THAP4Q8WY91 577 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 PRR11Q96HE9 360 aaPredicted RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 DOHHQ9BU89 302 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 TMEM121BQ9BXQ6 578 aaPredicted RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 ITGB7P26010 798 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 NUDT1P36639 197 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 P2RY2P41231 377 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 FOLR3P41439 243 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 TNFRSF4P43489 277 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 SIM1P81133 766 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms