RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CNOT1A5YKK6 2376 aaKnown RBP16.53■□□□□ 0.24
SREK1-216ENST00000612404 TMX2-CTNND1H3BSU7 103 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 CDC123O75794 336 aaPredicted RBP16.53■□□□□ 0.24
SREK1-216ENST00000612404 FGF5P12034 268 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 FBLP22087 321 aaKnown RBP16.53■□□□□ 0.24
SREK1-216ENST00000612404 FEN1P39748 380 aaKnown RBP16.53■□□□□ 0.24
SREK1-216ENST00000612404 XCR1P46094 333 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 TRPC1P48995 793 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 MC2RQ01718 297 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 ZNF750Q32MQ0 723 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 GTDC1Q4AE62 458 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 HES3Q5TGS1 186 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 RHBDD2Q6NTF9 364 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 PRMT9Q6P2P2 845 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 OR4N5Q8IXE1 308 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 CNRIP1Q96F85 164 aaPredicted RBP16.53■□□□□ 0.24
SREK1-216ENST00000612404 ZBED6CLQ96FA7 236 aaPredicted RBP16.53■□□□□ 0.24
SREK1-216ENST00000612404 GBP5Q96PP8 586 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 GPATCH1Q9BRR8 931 aaKnown RBP16.53■□□□□ 0.24
SREK1-216ENST00000612404 SPAG4Q9NPE6 437 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 SLAMF7Q9NQ25 335 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 SLC39A1Q9NY26 324 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 LOXL2Q9Y4K0 774 aa16.53■□□□□ 0.24
SREK1-216ENST00000612404 LDB3O75112 727 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 NQO1P15559 274 aaKnown RBP16.52■□□□□ 0.24
SREK1-216ENST00000612404 NCBP2P52298 156 aaKnown RBP eCLIP16.52■□□□□ 0.247e-9■■■■□ 21.1
SREK1-216ENST00000612404 SLC7A2P52569 658 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 PCBP4P57723 403 aaKnown RBP16.52■□□□□ 0.24
SREK1-216ENST00000612404 HBA1P69905 142 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 DMTNQ08495 405 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 HSPB3Q12988 150 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 ERV3-1Q14264 604 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 ARHGAP40Q5TG30 622 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 NANOGP8Q6NSW7 305 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 C8orf82Q6P1X6 216 aaPredicted RBP16.52■□□□□ 0.24
SREK1-216ENST00000612404 ZNF551Q7Z340 670 aaPredicted RBP16.52■□□□□ 0.24
SREK1-216ENST00000612404 ARHGAP24Q8N264 748 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 OR4K14Q8NGD5 310 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 DEPDC7Q96QD5 511 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 NANOGQ9H9S0 305 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 FBXO8Q9NRD0 319 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 TRPC4Q9UBN4 977 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 PACSIN3Q9UKS6 424 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 ERVK-11Q9UQG0 969 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 MRPS33Q9Y291 106 aaKnown RBP16.52■□□□□ 0.24
SREK1-216ENST00000612404 CEP250Q9BV73 2442 aa16.52■□□□□ 0.24
SREK1-216ENST00000612404 A0A1W2PS29 197 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 B4GALT2O60909 372 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 FTH1P19P0C7X4 201 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 CDK4P11802 303 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 ITIH1P19827 911 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 SLC6A2P23975 617 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 ID2Q02363 134 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 DSG2Q14126 1118 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 RABL3Q5HYI8 236 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 LRIF1Q5T3J3 769 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 RAB11FIP2Q7L804 512 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 RNF148Q8N7C7 305 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 SLC38A9Q8NBW4 561 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 ADAMTS18Q8TE60 1221 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 TANKQ92844 425 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 UTP4Q969X6 686 aaKnown RBP16.52■□□□□ 0.23
SREK1-216ENST00000612404 TBC1D20Q96BZ9 403 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 AURKBQ96GD4 344 aaPredicted RBP16.52■□□□□ 0.23
SREK1-216ENST00000612404 RAB3IPQ96QF0 476 aaPredicted RBP16.52■□□□□ 0.23
SREK1-216ENST00000612404 SLC25A37Q9NYZ2 338 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 VPS4AQ9UN37 437 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 MAP4K5Q9Y4K4 846 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 PCDHB3Q9Y5E6 796 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 SNX8Q9Y5X2 465 aa16.52■□□□□ 0.23
SREK1-216ENST00000612404 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 PDE5AO76074 875 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 HBQ1P09105 142 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 CSNK2A2P19784 350 aaPredicted RBP16.51■□□□□ 0.23
SREK1-216ENST00000612404 PTPN6P29350 595 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 XKP51811 444 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 FOLH1Q04609 750 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.51■□□□□ 0.23
SREK1-216ENST00000612404 MSRB3Q8IXL7 192 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 CCDC116Q8IYX3 515 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 NETO1Q8TDF5 533 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 OR5P2Q8WZ92 322 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 AMDHD1Q96NU7 426 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 GLIPR2Q9H4G4 154 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 PRDM9Q9NQV7 894 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 ACSS1Q9NUB1 689 aaPredicted RBP16.51■□□□□ 0.23
SREK1-216ENST00000612404 TAS2R9Q9NYW1 312 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 RAPGEFL1Q9UHV5 662 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 PRPF19Q9UMS4 504 aaKnown RBP16.51■□□□□ 0.23
SREK1-216ENST00000612404 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 MYOCOSA0A1B0GUC4 107 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 MYO1GB0I1T2 1018 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 B4E171 279 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 FGF17O60258 216 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 FHP07954 510 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 MPIP34949 423 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 SOAT1P35610 550 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 TSPAN7P41732 249 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 FRKP42685 505 aaPredicted RBP16.51■□□□□ 0.23
SREK1-216ENST00000612404 MAPK10P53779 464 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms