RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 NPIPA1Q9UND3 350 aa16.92■□□□□ 0.3
VCX3A-203ENST00000612369 ERVK-11Q9UQG0 969 aa16.92■□□□□ 0.3
VCX3A-203ENST00000612369 ZNF835Q9Y2P0 537 aa16.92■□□□□ 0.3
VCX3A-203ENST00000612369 ATG4BQ9Y4P1 393 aa16.92■□□□□ 0.3
VCX3A-203ENST00000612369 ASB4Q9Y574 426 aa16.92■□□□□ 0.3
VCX3A-203ENST00000612369 A0A0A6YYD5 115 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 MYOCOSA0A1B0GUC4 107 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 CCL21O00585 134 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 PEX1O43933 1283 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 OTCP00480 354 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 RPS17P08708 135 aaKnown RBP16.91■□□□□ 0.3
VCX3A-203ENST00000612369 MEOX1P50221 254 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 NEK2P51955 445 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 HK2P52789 917 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 HNRNPH2P55795 449 aaKnown RBP16.91■□□□□ 0.3
VCX3A-203ENST00000612369 PLIN5Q00G26 463 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 ID2Q02363 134 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 FOLH1Q04609 750 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 TRAF3Q13114 568 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 C18orf63Q68DL7 685 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
VCX3A-203ENST00000612369 HIST2H2BCQ6DN03 193 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 Q6ZPB1 254 aaPredicted RBP16.91■□□□□ 0.3
VCX3A-203ENST00000612369 MILR1Q7Z6M3 343 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 SPPL2CQ8IUH8 684 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 SULF2Q8IWU5 870 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 ST13P4Q8IZP2 240 aaPredicted RBP16.91■□□□□ 0.3
VCX3A-203ENST00000612369 TMEM151AQ8N4L1 468 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 C16orf52Q8NHV5 167 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 ZNF721Q8TF20 911 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 ASB15Q8WXK1 588 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 CDK15Q96Q40 435 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.91■□□□□ 0.3
VCX3A-203ENST00000612369 MYO7BQ6PIF6 2116 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 NBPF19A0A087WUL8 3843 aa16.91■□□□□ 0.3
VCX3A-203ENST00000612369 IQANK1A0A1B0GTG1 560 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 EEDO75530 441 aaKnown RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 WISP2O76076 250 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 ETHE1O95571 254 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 GPR75O95800 540 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 SBK3P0C264 359 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 FAM58BPP0C7Q3 252 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 ALOX15P16050 662 aaPredicted RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 TAC1P20366 129 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 GCAP28676 217 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 GALNSP34059 522 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 IFT88Q13099 833 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 RPTNQ6XPR3 784 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 MDGA2Q7Z553 956 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 OR4N5Q8IXE1 308 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 SLC34A3Q8N130 599 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 EIF1ADQ8N9N8 165 aaKnown RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 ZFP62Q8NB50 900 aaPredicted RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 NUBPLQ8TB37 319 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 SENP5Q96HI0 755 aaPredicted RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 NSUN5Q96P11 429 aaKnown RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 RASL10BQ96S79 203 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 TSPAN10Q9H1Z9 355 aaPredicted RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 SEMA4BQ9NPR2 832 aaPredicted RBP16.9■□□□□ 0.3
VCX3A-203ENST00000612369 ADAM29Q9UKF5 820 aa16.9■□□□□ 0.3
VCX3A-203ENST00000612369 CROCCQ5TZA2 2017 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 A8MT66 165 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 WWP2O00308 870 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 TMPRSS11DO60235 418 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 IGKV3-11P04433 115 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 RHOXF2BP0C7M4 288 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 NR2F6P10588 404 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 MPEG1Q2M385 716 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 SPRED3Q2MJR0 410 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 RNFT1Q5M7Z0 435 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 OPN5Q6U736 354 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 IL20RBQ6UXL0 311 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 PAGE2Q7Z2X7 111 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 ZNF321PQ8N8H1 164 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 PSD4Q8NDX1 1056 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 OR4F6Q8NGB9 312 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 ACMSDQ8TDX5 336 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 ZNF483Q8TF39 744 aaPredicted RBP16.89■□□□□ 0.29
VCX3A-203ENST00000612369 MTFMTQ96DP5 389 aaKnown RBP16.89■□□□□ 0.29
VCX3A-203ENST00000612369 CCDC120Q96HB5 630 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 FBXL20Q96IG2 436 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 SGCZQ96LD1 299 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 RHOXF2Q9BQY4 288 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 TXLNGYQ9BZA5 131 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 ELOVL6Q9H5J4 265 aa16.89■□□□□ 0.29
VCX3A-203ENST00000612369 LIN28AQ9H9Z2 209 aaKnown RBP16.89■□□□□ 0.29
VCX3A-203ENST00000612369 A0A1W2PR48 441 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 TFECO14948 347 aaPredicted RBP16.88■□□□□ 0.29
VCX3A-203ENST00000612369 OR6B1O95007 311 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 ESRRAP11474 423 aaPredicted RBP16.88■□□□□ 0.29
VCX3A-203ENST00000612369 ABOP16442 354 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 COL8A1P27658 744 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 SOX3P41225 446 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 HERVK_113P63132 956 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 ART3Q13508 389 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 SLC29A2Q14542 456 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 C3AR1Q16581 482 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 C16orf47Q6ZP98 133 aaPredicted RBP16.88■□□□□ 0.29
VCX3A-203ENST00000612369 RTL4Q6ZR62 310 aa16.88■□□□□ 0.29
VCX3A-203ENST00000612369 ZNF808Q8N4W9 903 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms