RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FAM131BQ86XD5 332 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 TBC1D10CQ8IV04 446 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF440Q8IYI8 595 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 SPEM1Q8N4L4 309 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 RTL3Q8N8U3 475 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 MIPOL1Q8TD10 442 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 TCP11Q8WWU5 503 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 GLYATL1Q969I3 302 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 PCED1BQ96HM7 432 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 CXorf58Q96LI9 332 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF560Q96MR9 790 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 ALKBH3Q96Q83 286 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 PRAM1Q96QH2 718 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 NAP1L3Q99457 506 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 VGLL1Q99990 258 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 WWP1Q9H0M0 922 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 TMEM245Q9H330 911 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 DCLRE1BQ9H816 532 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 NMUR1Q9HB89 426 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 PRMT8Q9NR22 394 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 APPL1Q9UKG1 709 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 IGHV3OR16-10A0A075B7F0 116 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 SYCE3A1L190 88 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 TMEM110-MUSTN1A8MSY1 372 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 ARHGEF33A8MVX0 844 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 A8MXK9 166 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 CPLX1O14810 134 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 KIAA0513O60268 411 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 CSO75390 466 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 OR6A2O95222 327 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 POP4O95707 220 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 SFTPBP07988 381 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 ABHD2P08910 425 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 PCP11498 1178 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 AREGP15514 252 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF10P21506 573 aaPredicted RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 OXTRP30559 389 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 KIF5BP33176 963 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 ZFP36L2P47974 494 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 TRPC1P48995 793 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF146Q15072 292 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 OR1C1Q15619 314 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 HSP90AB3PQ58FF7 597 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 CDHR3Q6ZTQ4 885 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 RNF130Q86XS8 419 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 OR4L1Q8NH43 312 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 NPRL2Q8WTW4 380 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 GIMAP1Q8WWP7 306 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 C11orf52Q96A22 123 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 MRPL24Q96A35 216 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 TSGA13Q96PP4 275 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 TNFRSF13CQ96RJ3 184 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 RAB40CQ96S21 281 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 GANQ9H2C0 597 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 THAP9Q9H5L6 903 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 WDR41Q9HAD4 459 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 DDX28Q9NUL7 540 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 ACOXLQ9NUZ1 547 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 TBK1Q9UHD2 729 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 MRTO4Q9UKD2 239 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 SMC3Q9UQE7 1217 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 MOB4Q9Y3A3 225 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 TEX264Q9Y6I9 313 aa3.53□□□□□ -1.84
SMCHD1-213ENST00000609587 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 EPM2AB3EWF7 344 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 TLR4O00206 839 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 PDHXO00330 501 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 ZBTB14O43829 449 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 HSF2BPO75031 334 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 CSDE1O75534 798 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 MT-ND3P03897 115 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF18P17022 549 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 ID1P41134 155 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 CD86P42081 329 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 NSFP46459 744 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 GEMP55040 296 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 HERV-K104P63124 156 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 SRPXP78539 464 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 HSPA14Q0VDF9 509 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 RIGQ13278 110 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 TSTA3Q13630 321 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 TRADDQ15628 312 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 CCBE1Q6UXH8 406 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 CATSPER4Q7RTX7 472 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 CARM1Q86X55 608 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 WDR49Q8IV35 697 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 ARL10Q8N8L6 244 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 OR6M1Q8NGM8 313 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 GOLGA5Q8TBA6 731 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 CHPT1Q8WUD6 406 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 SLCO4A1Q96BD0 722 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 DTD2Q96FN9 168 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 RBM4BQ9BQ04 359 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 ANP32EQ9BTT0 268 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 TEX13AQ9BXU3 409 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 STRADBQ9C0K7 418 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 KCNMB3Q9NPA1 279 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 GDF3Q9NR23 364 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms