RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 RIN1Q13671 783 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 EFR3AQ14156 821 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 SYTL3Q4VX76 610 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 ZNF648Q5T619 568 aaPredicted RBP21.29■■□□□ 1
SHANK2-220ENST00000608988 LIPKQ5VXJ0 399 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 CREB3L2Q70SY1 520 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 LAPTM4BQ86VI4 370 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 CPXM2Q8N436 756 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 FBXO15Q8NCQ5 510 aaPredicted RBP21.29■■□□□ 1
SHANK2-220ENST00000608988 FIBINQ8TAL6 211 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 SOSTQ9BQB4 213 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 NLNQ9BYT8 704 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 POLR2J3Q9H1A7 115 aaKnown RBP21.29■■□□□ 1
SHANK2-220ENST00000608988 RBFOX1Q9NWB1 397 aaKnown RBP21.29■■□□□ 1
SHANK2-220ENST00000608988 ING3Q9NXR8 418 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 STMN3Q9NZ72 180 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 GSTK1Q9Y2Q3 226 aa21.29■■□□□ 1
SHANK2-220ENST00000608988 A0A0B4J293 547 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 OR6C70A6NIJ9 312 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 C5orf58C9J3I9 102 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 SLC30A4O14863 429 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 PRKAR1AP10644 381 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 SRCP12931 536 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 ALAS2P22557 587 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 HLA-FP30511 346 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 GPC1P35052 558 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 LIM2P55344 173 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 CD83Q01151 205 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 SEMG2Q02383 582 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 LMAN2Q12907 356 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 PUM1Q14671 1186 aaKnown RBP eCLIP21.28■■□□□ 1
SHANK2-220ENST00000608988 CCNJQ5T5M9 372 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 SIGIRRQ6IA17 410 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 ZNF730Q6ZMV8 503 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 RFLNAQ6ZTI6 216 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 ADAMTS19Q8TE59 1207 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 UBASH3BQ8TF42 649 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 RNF31Q96EP0 1072 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 DMRT3Q9NQL9 472 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 NFKBIL1Q9UBC1 381 aaPredicted RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 TESQ9UGI8 421 aaKnown RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 ACSL6Q9UKU0 697 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 ACAD8Q9UKU7 415 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 LINC00854A0A1B0GVQ3 168 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 TMEM129A0AVI4 362 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 HEPACAM2A8MVW5 462 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 H3BN98 237 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 ERVH48-1M5A8F1 160 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 PLD2O14939 933 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 IMPA1P29218 277 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 FGF9P31371 208 aaPredicted RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 DGKGP49619 791 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 STK19P49842 368 aaPredicted RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 WNT4P56705 351 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 POLR2LP62875 67 aaKnown RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 MPEG1Q2M385 716 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 CYP27C1Q4G0S4 372 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 MPPE1Q53F39 396 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 TRIQKQ629K1 86 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 TPGS2Q68CL5 300 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 HIST2H2AA3Q6FI13 130 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 PGBD2Q6P3X8 592 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 QSOX2Q6ZRP7 698 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 UTS2BQ765I0 119 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 TCEANCQ8N8B7 351 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 C19orf18Q8NEA5 215 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 OR52I1Q8NGK6 324 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 TMEM163Q8TC26 289 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 CIDECQ96AQ7 238 aaPredicted RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 TMEM159Q96B96 161 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 FOPNLQ96NB1 174 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 ZIC5Q96T25 663 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 COQ7Q99807 217 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 FUZQ9BT04 418 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 PRM3Q9NNZ6 103 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 FGF20Q9NP95 211 aaPredicted RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 RHCGQ9UBD6 479 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 LSM7Q9UK45 103 aaKnown RBP21.28■■□□□ 1
SHANK2-220ENST00000608988 YIPF1Q9Y548 306 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 ASB4Q9Y574 426 aa21.28■■□□□ 1
SHANK2-220ENST00000608988 PITPNM1O00562 1244 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 OR10H3O60404 316 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 POP4O95707 220 aaKnown RBP21.27■■□□□ 1
SHANK2-220ENST00000608988 CRYZL1O95825 349 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 NR2F6P10588 404 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 ACADMP11310 421 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 MYL12AP19105 171 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 SOAT1P35610 550 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 CASP9P55211 416 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 TARDBPQ13148 414 aaKnown RBP eCLIP21.27■■□□□ 1
SHANK2-220ENST00000608988 GPR162Q16538 588 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.27■■□□□ 12e-7■■■■□ 25.8
SHANK2-220ENST00000608988 ARMCX6Q7L4S7 300 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 YIPF7Q8N8F6 280 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 NEURL3Q96EH8 262 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 PKP4Q99569 1192 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 TRIM39Q9HCM9 518 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 B4GALT6Q9UBX8 382 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 ANAPC1Q9H1A4 1944 aa21.27■■□□□ 1
SHANK2-220ENST00000608988 SNTNA6NMZ2 147 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms