RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 RPL36Q9Y3U8 105 aaKnown RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 B4DGG1 531 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SOCS5O75159 536 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 FCER2P06734 321 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CXCR2P25025 360 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 IFNGR2P38484 337 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CRISP1P54107 249 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PTGES3Q15185 160 aaKnown RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 TOMM20Q15388 145 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 TCEAL5Q5H9L2 206 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 TMEM31Q5JXX7 168 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 XAF1Q6GPH4 301 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 OR8H1Q8NGG4 311 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ZCCHC10Q8TBK6 192 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 C17orf62Q9BQA9 187 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 EFCAB11Q9BUY7 163 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 FAIM2Q9BWQ8 316 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 BTBD1Q9H0C5 482 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SPATA7Q9P0W8 599 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 STOX2Q9P2F5 926 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 IL36AQ9UHA7 158 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ADAM30Q9UKF2 790 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CYP8B1Q9UNU6 501 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 IFT52Q9Y366 437 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PIAS3Q9Y6X2 628 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 A0A1B0GVC2 190 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 A6NIN4 97 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 H3BSH0 61 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PI15O43692 258 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SLITRK5O94991 958 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SAGP10523 405 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CLCNKAP51800 687 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CAV3P56539 151 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 REEP3Q6NUK4 255 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF852Q6ZMS4 543 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 MACC1Q6ZN28 852 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 HSD11B1LQ7Z5J1 315 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 FAM20CQ8IXL6 584 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 NRSN1Q8IZ57 195 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CDK20Q8IZL9 346 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 C10orf111Q8N326 155 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PARP16Q8N5Y8 322 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 LCN9Q8WX39 176 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 JPH3Q8WXH2 748 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 GATAD2BQ8WXI9 593 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PIGKQ92643 395 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 TFGQ92734 400 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 HDHD5Q9BXW7 423 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ANKRA2Q9H9E1 313 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 BACE2Q9Y5Z0 518 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 TMEM202A6NGA9 273 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 AGAP5A6NIR3 686 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CPNE6O95741 557 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 C1QCP02747 245 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CEBPBP17676 345 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 PBX2P40425 430 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 SELENOWP63302 87 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 SLC5A12Q1EHB4 618 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 BCL7AQ4VC05 210 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 LIPJQ5W064 366 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 ZDHHC20Q5W0Z9 365 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF438Q7Z4V0 828 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 ENTHD1Q8IYW4 607 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 KCT2Q8NC54 265 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 OR10H4Q8NGA5 316 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 SLC5A11Q8WWX8 675 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 TRIM63Q969Q1 353 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 TRIM43Q96BQ3 446 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-216ENST00000608263 PIP5K1AQ99755 562 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 WDR26Q9H7D7 661 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 NMNAT1Q9HAN9 279 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-216ENST00000608263 PDFQ9HBH1 243 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 NUFIP1Q9UHK0 495 aaKnown RBP9.9□□□□□ -0.82
CTCFL-216ENST00000608263 MKLN1Q9UL63 735 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 NEU3Q9UQ49 428 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 M0R3H8 397 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 RB1P06400 928 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 SLC2A2P11168 524 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CPN2P22792 545 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 VIPR1P32241 457 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF45Q02386 682 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 TGM3Q08188 693 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 SF3B4Q15427 424 aaKnown RBP eCLIP9.9□□□□□ -0.825e-10■□□□□ 9.4
CTCFL-216ENST00000608263 FBXO43Q4G163 708 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 LCN1P1Q5VSP4 162 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CCDC116Q8IYX3 515 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 METTL4Q8N3J2 472 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 RLN3Q8WXF3 142 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 GLYATL1Q969I3 302 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CRELD1Q96HD1 420 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF300Q96RE9 604 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-216ENST00000608263 NEURL2Q9BR09 285 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 SMURF1Q9HCE7 757 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 MARCH5Q9NX47 278 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CDH7Q9ULB5 785 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 CARD8Q9Y2G2 431 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF831Q5JPB2 1677 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 DOCK1Q14185 1865 aa9.9□□□□□ -0.82
CTCFL-216ENST00000608263 A0A1W2PPK0 400 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms