RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PTPN3P26045 913 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 NMBRP28336 390 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC6A1P30531 599 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CSF2RBP32927 897 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MMP12P39900 470 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CRYBB2P43320 205 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CRKLP46109 303 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CCT3P49368 545 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 EVX1P49640 407 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MAN2A2P49641 1150 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPR143P51810 404 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 EFNA5P52803 228 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 UFM1P61960 85 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SNRPD2P62316 118 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PPP3R1P63098 170 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 IL1RL1Q01638 556 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TUSC3Q13454 348 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 EXOSC2Q13868 293 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SF1Q15637 639 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 GUCA2BQ16661 112 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 WSCD2Q2TBF2 565 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 FUT11Q495W5 492 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRIM60Q495X7 471 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MTERF2Q49AM1 385 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 IQCCQ4KMZ1 466 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 KLHL22Q53GT1 634 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PLA1AQ53H76 456 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CARD16Q5EG05 197 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 C6orf136Q5SQH8 315 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PDSS1Q5T2R2 415 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 LRIF1Q5T3J3 769 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CERCAMQ5T4B2 595 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 METTL11BQ5VVY1 283 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 JADE1Q6IE81 842 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR6B2Q6IFH4 312 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ERICH5Q6P6B1 374 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ENPP6Q6UWR7 440 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CES3Q6UWW8 571 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PAMR1Q6UXH9 720 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ALKAL1Q6UXT8 129 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CFAP77Q6ZQR2 320 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 USP53Q70EK8 1073 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 AHSA2Q719I0 299 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CCDC71Q8IV32 467 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 C1orf210Q8IVY1 113 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 NAXDQ8IW45 347 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 DENND6AQ8IWF6 608 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CMIPQ8IY22 773 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 LRRC71Q8N4P6 559 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MS4A15Q8N5U1 240 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 EFHBQ8N7U6 833 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC37A3Q8NCC5 494 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 C19orf18Q8NEA5 215 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR1M1Q8NGA1 313 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR2T4Q8NH00 348 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR6S1Q8NH40 331 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM163Q8TC26 289 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 GANCQ8TET4 914 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC35F5Q8WV83 523 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 AP3S1Q92572 193 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 UCN3Q969E3 161 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 NT5C3BQ969T7 300 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC25A46Q96AG3 418 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 COQ8BQ96D53 544 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRMT61AQ96FX7 289 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDKN2AIPNLQ96HQ2 116 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 AJUBAQ96IF1 538 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SENP8Q96LD8 212 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CAMKK2Q96RR4 588 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MNTQ99583 582 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCNS3Q9BQ31 491 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CHCHD6Q9BRQ6 235 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM175Q9BSA9 504 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MSTO1Q9BUK6 570 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MLPHQ9BV36 600 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ELOVL4Q9GZR5 314 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SIK2Q9H0K1 926 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PORCNQ9H237 461 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCNH6Q9H252 994 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 LTB4R2Q9NPC1 389 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 RASSF1Q9NS23 344 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 KRT84Q9NSB2 600 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TREX1Q9NSU2 369 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 HPF1Q9NWY4 346 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SDHAF2Q9NX18 166 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ASIC5Q9NY37 505 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 COPZ2Q9P299 210 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PLEKHB1Q9UF11 243 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCP2D1Q9UJQ7 156 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 FZD10Q9ULW2 581 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MGAT4AQ9UM21 535 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SAMD4AQ9UPU9 718 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 BAIAP2Q9UQB8 552 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 NCKAP1Q9Y2A7 1128 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PADI2Q9Y2J8 665 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 AAR2Q9Y312 384 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 DERAQ9Y315 318 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMX2Q9Y320 296 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 NEUROG3Q9Y4Z2 214 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCDHGA6Q9Y5G7 932 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms