RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TAC4Q86UU9 113 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 KLBQ86Z14 1044 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PCDH20Q8N6Y1 951 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SGTBQ96EQ0 304 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 RNFT2Q96EX2 444 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 C16orf92Q96LL3 132 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 COPS4Q9BT78 406 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SIRPDQ9H106 197 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 POLR3FQ9H1D9 316 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ADAMTS10Q9H324 1103 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 C11orf49Q9H6J7 331 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 GPN2Q9H9Y4 310 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 BEX4Q9NWD9 120 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 KLHL8Q9P2G9 620 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 STK36Q9NRP7 1315 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TRAV25A0A0B4J276 109 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TEX13CA0A0J9YWL9 993 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A1W2PPC1 479 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TRABD2BA6NFA1 517 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 SH2D7A6NKC9 451 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MAN2B1O00754 1011 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CLDN4O14493 209 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 BCKDKO14874 412 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC31A2O15432 143 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PRICKLE3O43900 615 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 HUS1O60921 280 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TRIM3O75382 744 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 IGHV2-70P01814 119 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ERBB2P04626 1255 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 RLN1P04808 185 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 FCER2P06734 321 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 RBP1P09455 135 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 FBP1P09467 338 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 H2AFB2P0C5Z0 115 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TNNI1P19237 187 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TPSB2P20231 275 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CALML3P27482 149 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 FOXN2P32314 431 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 IFITM3Q01628 133 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 FLOT2Q14254 428 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PON3Q15166 354 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TPSAB1Q15661 275 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MAPK11Q15759 364 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PNLIPRP3Q17RR3 467 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 GPR157Q5UAW9 335 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ELP2Q6IA86 826 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM211Q6ICI0 200 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 OR5M10Q6IEU7 315 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 IL20RBQ6UXL0 311 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ETV3LQ6ZN32 361 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 RD3Q7Z3Z2 195 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 NOXA1Q86UR1 476 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 AMIGO1Q86WK6 493 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ADGRG3Q86Y34 549 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PLD3Q8IV08 490 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CPNE9Q8IYJ1 553 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 UBE2J2Q8N2K1 259 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 COMMD1Q8N668 190 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 OR4M2Q8NGB6 313 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 OCC1Q8TAD7 63 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ZFAND1Q8TCF1 268 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MAGEE2Q8TD90 523 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 RAB1CQ92928 201 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CPNE4Q96A23 557 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 NTAN1Q96AB6 310 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MRGPRFQ96AM1 343 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 C18orf25Q96B23 403 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 NXPE2Q96DL1 559 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 FBXO17Q96EF6 278 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ZHX1-C8orf76Q96EF9 292 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ZSWIM3Q96MP5 696 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM213AQ9BRX8 229 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 HRH4Q9H3N8 390 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF302Q9NR11 478 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 GDE1Q9NZC3 331 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM216Q9P0N5 145 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 COPG2Q9UBF2 871 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ABCD2Q9UBJ2 740 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PRSS50Q9UI38 385 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ADAM28Q9UKQ2 775 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PLAGL1Q9UM63 463 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ASB4Q9Y574 426 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 HSPE1-MOB4S4R3N1 261 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PALLDQ8WX93 1383 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ITGB4P16144 1822 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MYH9P35579 1960 aaKnown RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 SF3B1O75533 1304 aaKnown RBP eCLIP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A0A6YYK5 440 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MYOCOSA0A1B0GUC4 107 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A1W2PQJ5 194 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 OOEPA6NGQ2 149 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 EFCAB7A8K855 629 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 NPIPA7E9PJI5 369 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TMX2-CTNND1H3BSU7 103 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF264O43296 627 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 SGCEO43556 437 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 RHOP08100 348 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 NPIPA8P0DM63 369 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms