RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 MS4A8Q9BY19 250 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 OR51B5Q9H339 312 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 PALMDQ9NP74 551 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 SIRT5Q9NXA8 310 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 AHSPQ9NZD4 102 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 V9GYQ6 96 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 PI4KAP42356 2102 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 SEMA3DO95025 777 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 SERPINA1P01009 418 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 ELOAQ14241 798 aaKnown RBP11.1□□□□□ -0.63
VRK3-223ENST00000601341 NR1D2Q14995 579 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 DEPDC1Q5TB30 811 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 FCRL6Q6DN72 434 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 PIWIL3Q7Z3Z3 882 aaKnown RBP11.1□□□□□ -0.63
VRK3-223ENST00000601341 FAM181AQ8N9Y4 354 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 MFSD9Q8NBP5 474 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 CHDHQ8NE62 594 aaPredicted RBP11.1□□□□□ -0.63
VRK3-223ENST00000601341 BAHD1Q8TBE0 780 aaPredicted RBP11.1□□□□□ -0.63
VRK3-223ENST00000601341 CREB3L4Q8TEY5 395 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 THAP11Q96EK4 314 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 ZDHHC12Q96GR4 267 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 AHCYL2Q96HN2 611 aaKnown RBP11.1□□□□□ -0.63
VRK3-223ENST00000601341 GTPBP2Q9BX10 602 aaKnown RBP11.1□□□□□ -0.63
VRK3-223ENST00000601341 RAB33BQ9H082 229 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 ABCG4Q9H172 646 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 SEMA6CQ9H3T2 930 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 EVA1BQ9NVM1 165 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 EPHA6Q9UF33 1036 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 BTNL2Q9UIR0 455 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 CDC14AQ9UNH5 594 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
VRK3-223ENST00000601341 LAMA1P25391 3075 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 LOC100130705A0A1B0GUX0 176 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 A0A1B0GVG6 124 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 SIGLEC6O43699 453 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 SCN2BO60939 215 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 TBX6O95947 436 aaPredicted RBP11.09□□□□□ -0.63
VRK3-223ENST00000601341 SEMG1P04279 462 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 SERPIND1P05546 499 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 PNLIPP16233 465 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 ENGP17813 658 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 ITIH1P19827 911 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 CDH3P22223 829 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 LSSP48449 732 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 ISL1P61371 349 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 GPLD1P80108 840 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 KCNAB2Q13303 367 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 KEAP1Q14145 624 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 NR0B2Q15466 257 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 ZIC1Q15915 447 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 VMACQ2NL98 169 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 TMEM35AQ53FP2 167 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 ANXA8L1Q5VT79 327 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 GTF2IRD2BQ6EKJ0 949 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 XAF1Q6GPH4 301 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 LAIR1Q6GTX8 287 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 FBXO42Q6P3S6 717 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 GTF2IRD2Q86UP8 949 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 METTL4Q8N3J2 472 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 DRAXINQ8NBI3 349 aaPredicted RBP11.09□□□□□ -0.63
VRK3-223ENST00000601341 VPS37AQ8NEZ2 397 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 NETO1Q8TDF5 533 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 TSSK3Q96PN8 268 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 CD180Q99467 661 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 ZFYVE21Q9BQ24 234 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 TBCDQ9BTW9 1192 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 AMBRA1Q9C0C7 1298 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 C1GALT1Q9NS00 363 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 SLC6A13Q9NSD5 602 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 PCDHGA8Q9Y5G5 932 aa11.09□□□□□ -0.63
VRK3-223ENST00000601341 IGHV1OR21-1A0A087WYE8 117 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 CLIC1O00299 241 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 SAP18O00422 153 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 CAPN5O15484 640 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 NDUFS4O43181 175 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 DUX1O43812 170 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 E2F6O75461 281 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ANXA4P09525 319 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 PVRP15151 417 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 CCNA2P20248 432 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 TACR1P25103 407 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 SOX11P35716 441 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 OR1D5P58170 312 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PPP1CAP62136 330 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PLIN5Q00G26 463 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 VAC14Q08AM6 782 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 SUZ12Q15022 739 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 PGS1Q32NB8 556 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ZNF829Q3KNS6 432 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 GTDC1Q4AE62 458 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PLA2G2CQ5R387 149 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 GPR107Q5VW38 600 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 OR2T5Q6IEZ7 315 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 DNAJC14Q6Y2X3 702 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 COMMD6Q7Z4G1 85 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms