RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ACER2Q5QJU3 275 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 NDUFAF5Q5TEU4 345 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 ABHD17BQ5VST6 288 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 CES4AQ5XG92 561 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 DGAT2L6Q6ZPD8 337 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 Q6ZS92 163 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 NUDCD3Q8IVD9 361 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 ZNF321PQ8N8H1 164 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 APCDD1LQ8NCL9 501 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 B3GNT7Q8NFL0 401 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 DNAJB14Q8TBM8 379 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 SREK1Q8WXA9 508 aaKnown RBP14.2□□□□□ -0.14
LIG1-219ENST00000600055 NCLNQ969V3 563 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 PNPLA2Q96AD5 504 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 TM4SF18Q96CE8 201 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 TRMOQ9BU70 441 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 CDCP1Q9H5V8 836 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 TMBIM4Q9HC24 238 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 STMN3Q9NZ72 180 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 ZNF223Q9UK11 482 aaPredicted RBP14.2□□□□□ -0.14
LIG1-219ENST00000600055 B3GNT3Q9Y2A9 372 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 ACTL7BQ9Y614 415 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 DOCK10Q96BY6 2186 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 COL6A6A6NMZ7 2263 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 TRBV11-1A0A0K0K1C0 115 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 C17orf105B2RV13 164 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 AZIN1O14977 448 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 GPR75O95800 540 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 TNNI3P19429 210 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 ARG2P78540 354 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 TLE1Q04724 770 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 TERF2Q15554 542 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 ZNF750Q32MQ0 723 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 PRR30Q53SZ7 412 aaPredicted RBP14.19□□□□□ -0.14
LIG1-219ENST00000600055 SPDYAQ5MJ70 313 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 TRIM46Q7Z4K8 759 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 BEST3Q8N1M1 668 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 TMEM132CQ8N3T6 1108 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 OR6Y1Q8NGX8 325 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 ZNF354BQ96LW1 612 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 DGAT2Q96PD7 388 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 EBPLQ9BY08 206 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 ILKAPQ9H0C8 392 aaPredicted RBP14.19□□□□□ -0.14
LIG1-219ENST00000600055 TUBB1Q9H4B7 451 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 WDR41Q9HAD4 459 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 MCM8Q9UJA3 840 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 PPIEQ9UNP9 301 aaKnown RBP14.19□□□□□ -0.14
LIG1-219ENST00000600055 CLCA3PQ9Y6N3 262 aa14.19□□□□□ -0.14
LIG1-219ENST00000600055 TLN1Q9Y490 2541 aaKnown RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 CFAP46Q8IYW2 2715 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 TTLL8A6PVC2 850 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 TM9SF1O15321 606 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 PCDH7O60245 1069 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 PRKNO60260 465 aaPredicted RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 DDAH2O95865 285 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 DHRS4L1P0CG22 281 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 ALOX15P16050 662 aaPredicted RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 STT3AP46977 705 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 CLCN2P51788 898 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 TAS2R50P59544 299 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 MAGOHP61326 146 aaKnown RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 ACSM2AQ08AH3 577 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 IMPG1Q17R60 797 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 KANK2Q63ZY3 851 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 ACSM2BQ68CK6 577 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 OR52E8Q6IFG1 317 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 SLC5A8Q8N695 610 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 ANKRD42Q8N9B4 389 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 AGR3Q8TD06 166 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 THAP3Q8WTV1 239 aaPredicted RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 HAS2Q92819 552 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 DAZLQ92904 295 aaKnown RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 C11orf24Q96F05 449 aaPredicted RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 VMP1Q96GC9 406 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 DEFB126Q9BYW3 111 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 OR8D2Q9GZM6 311 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 ZNF395Q9H8N7 513 aaPredicted RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 LIN28AQ9H9Z2 209 aaKnown RBP14.18□□□□□ -0.14
LIG1-219ENST00000600055 SLAMF7Q9NQ25 335 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 TEKT2Q9UIF3 430 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 TRAF6Q9Y4K3 522 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 CCL27Q9Y4X3 112 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 PCDHA9Q9Y5H5 950 aa14.18□□□□□ -0.14
LIG1-219ENST00000600055 DYTNA2CJ06 578 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 SYNDIG1LA6NDD5 238 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 HRKO00198 91 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 ITM2AO43736 263 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 LYPLA1O75608 230 aaPredicted RBP14.17□□□□□ -0.14
LIG1-219ENST00000600055 ZWINTO95229 277 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 LINC00032P0C843 101 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 TIA1P31483 386 aaKnown RBP eCLIP14.17□□□□□ -0.14
LIG1-219ENST00000600055 PLIN5Q00G26 463 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 ZNF169Q14929 603 aaPredicted RBP14.17□□□□□ -0.14
LIG1-219ENST00000600055 CHI3L2Q15782 390 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 IGFBP7Q16270 282 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 MEP1AQ16819 746 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 UGT3A2Q3SY77 523 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 SPIN4Q56A73 249 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 SH2D4BQ5SQS7 431 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 C16orf47Q6ZP98 133 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms