RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 AENQ8WTP8 325 aaKnown RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 ZNF473Q8WTR7 871 aaKnown RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 DAZLQ92904 295 aaKnown RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 KCNC2Q96PR1 638 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 RBBP8Q99708 897 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 EFCAB11Q9BUY7 163 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 LYRM4Q9HD34 91 aa13.57□□□□□ -0.24
IRF3-223ENST00000599223 TUBA8Q9NY65 449 aaPredicted RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 PTBP2Q9UKA9 531 aaKnown RBP13.57□□□□□ -0.24
IRF3-223ENST00000599223 KIAA1549Q9HCM3 1950 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 NINQ8N4C6 2090 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 TCRBV9S1A1TA0A576 114 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 SAP18O00422 153 aaKnown RBP13.56□□□□□ -0.24
IRF3-223ENST00000599223 CCNT2O60583 730 aaKnown RBP13.56□□□□□ -0.24
IRF3-223ENST00000599223 NADKO95544 446 aaPredicted RBP13.56□□□□□ -0.24
IRF3-223ENST00000599223 GLI4P10075 376 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 ACVR2AP27037 513 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 ADH7P40394 386 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 SLC12A2P55011 1212 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 PLTPP55058 493 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 STX4Q12846 297 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 DLG1Q12959 904 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 CBLBQ13191 982 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 E2F2Q14209 437 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 EFTUD2Q15029 972 aaKnown RBP eCLIP13.56□□□□□ -0.246e-7■■■■□ 23.8
IRF3-223ENST00000599223 LYPD8Q6UX82 237 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 GK5Q6ZS86 529 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 SLC22A16Q86VW1 577 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 LIX1LQ8IVB5 337 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 GSPT2Q8IYD1 628 aaKnown RBP13.56□□□□□ -0.24
IRF3-223ENST00000599223 FAM109AQ8N4B1 249 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 GOLM1Q8NBJ4 401 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 DOK4Q8TEW6 326 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 UBXN10Q96LJ8 280 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 FAM173AQ9BQD7 235 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 TTYH2Q9BSA4 534 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 CNPPD1Q9BV87 410 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 CAPS2Q9BXY5 557 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 CNOT10Q9H9A5 744 aaKnown RBP13.56□□□□□ -0.24
IRF3-223ENST00000599223 SH2D2AQ9NP31 389 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 KCNJ16Q9NPI9 418 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 NSMCE4AQ9NXX6 385 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 CD274Q9NZQ7 290 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 SPRR3Q9UBC9 169 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 ATG4BQ9Y4P1 393 aa13.56□□□□□ -0.24
IRF3-223ENST00000599223 A0A0G2JNJ9 132 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 A0A1B0GVC2 190 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 ATP6AP2A0A1C7CYW4 349 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 OR14I1A6ND48 311 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 ATP6AP2O75787 350 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 FAM155BO75949 473 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 KRT38O76015 456 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 IGKV3-11P04433 115 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 HIST1H1TP22492 207 aaPredicted RBP13.55□□□□□ -0.24
IRF3-223ENST00000599223 PIGAP37287 484 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 DLX5P56178 289 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 IGLV3-21P80748 117 aaPredicted RBP13.55□□□□□ -0.24
IRF3-223ENST00000599223 IRF8Q02556 426 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 ASPHQ12797 758 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 CASP8Q14790 479 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 TBCCQ15814 346 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 CDKL4Q5MAI5 379 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 NDUFAF5Q5TEU4 345 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 ZNF585AQ6P3V2 769 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 FAM47EQ6ZV65 393 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 LRRC70Q7Z2Q7 622 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 CMC1Q7Z7K0 106 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 OR8K3Q8NH51 312 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 KIAA1191Q96A73 305 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 TSPAN17Q96FV3 270 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 ALG9Q9H6U8 611 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 ZNF703Q9H7S9 590 aaPredicted RBP13.55□□□□□ -0.24
IRF3-223ENST00000599223 VIPAS39Q9H9C1 493 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 IL1RL2Q9HB29 575 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 SAYSD1Q9NPB0 183 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 Q9UFV3 132 aa13.55□□□□□ -0.24
IRF3-223ENST00000599223 PRRC2AP48634 2157 aaKnown RBP13.55□□□□□ -0.24
IRF3-223ENST00000599223 LRRC3CA6NJW4 275 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 FAM159BA6NKW6 160 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 FIGNL2A6NMB9 653 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 UBXN8O00124 270 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 AQP7O14520 342 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 KLK8O60259 260 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 LRATO95237 230 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 TGFB1P01137 390 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 HOXD4P09016 255 aaPredicted RBP13.54□□□□□ -0.24
IRF3-223ENST00000599223 SLC35E2BP0CK96 405 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 PCNAP12004 261 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 STMN1P16949 149 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 TNNI3P19429 210 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 CNR1P21554 472 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 HPDP32754 393 aaPredicted RBP13.54□□□□□ -0.24
IRF3-223ENST00000599223 GP5P40197 560 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 SSR2P43308 183 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 GPX6P59796 221 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 RAB10P61026 200 aa13.54□□□□□ -0.24
IRF3-223ENST00000599223 ATP6V0D1P61421 351 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms