RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 TEX10Q9NXF1 929 aaPredicted RBP15.04■□□□□ -0
TRIM28-213ENST00000598355 AHSPQ9NZD4 102 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 SLC12A4Q9UP95 1085 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 DOPEY2Q9Y3R5 2298 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 EML6Q6ZMW3 1958 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 TRBV11-1A0A0K0K1C0 115 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 TMEM200CA6NKL6 621 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 GABRR3A8MPY1 467 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 A8MUI8 341 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 GBAP04062 536 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 IGKV3-11P04433 115 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 UQCRHP07919 91 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 HMOX2P30519 316 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 TLX1P31314 330 aaPredicted RBP15.03■□□□□ -0
TRIM28-213ENST00000598355 TRHRP34981 398 aaPredicted RBP15.03■□□□□ -0
TRIM28-213ENST00000598355 FOXA1P55317 472 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 KCNC4Q03721 635 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 SPRED3Q2MJR0 410 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 TNFAIP8L3Q5GJ75 292 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 ZNF324BQ6AW86 544 aaPredicted RBP15.03■□□□□ -0
TRIM28-213ENST00000598355 OR52E8Q6IFG1 317 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 CYP20A1Q6UW02 462 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 RPS19BP1Q86WX3 136 aaKnown RBP15.03■□□□□ -0
TRIM28-213ENST00000598355 ST13P4Q8IZP2 240 aaPredicted RBP15.03■□□□□ -0
TRIM28-213ENST00000598355 CISD2Q8N5K1 135 aaKnown RBP15.03■□□□□ -0
TRIM28-213ENST00000598355 OR8K3Q8NH51 312 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 METTL6Q8TCB7 284 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 CHTF18Q8WVB6 975 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 SCMH1Q96GD3 660 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 KCNA7Q96RP8 456 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 TNFRSF12AQ9NP84 129 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 ASH1LQ9NR48 2969 aaKnown RBP15.03■□□□□ -0
TRIM28-213ENST00000598355 SENP1Q9P0U3 644 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 ABI3Q9P2A4 366 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 VPS29Q9UBQ0 182 aa15.03■□□□□ -0
TRIM28-213ENST00000598355 TYROBPO43914 113 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 PRKNO60260 465 aaPredicted RBP15.02■□□□□ -0
TRIM28-213ENST00000598355 PRAMEF2O60811 474 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 ULK1O75385 1050 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 NEURL1O76050 574 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 GPR75O95800 540 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 KLK1P06870 262 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 CHN1P15882 459 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 GALNSP34059 522 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 CD96P40200 585 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 PLIN5Q00G26 463 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 ID2Q02363 134 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 SGO1Q5FBB7 561 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 GALNT18Q6P9A2 607 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 RNF165Q6ZSG1 346 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 ATCAYQ86WG3 371 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 ZNF227Q86WZ6 799 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 C10orf107Q8IVU9 208 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 CCNYL1Q8N7R7 359 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 OR1N1Q8NGS0 311 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 SLC2A12Q8TD20 617 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 ZNF721Q8TF20 911 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 SIGLEC12Q96PQ1 595 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 SLX1AQ9BQ83 275 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 PELOQ9BRX2 385 aaKnown RBP15.02■□□□□ -0
TRIM28-213ENST00000598355 TRMOQ9BU70 441 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 CDCP1Q9H5V8 836 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 PRM3Q9NNZ6 103 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 MID1IP1Q9NPA3 183 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 NMRK1Q9NWW6 199 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 SIRT5Q9NXA8 310 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 SLC17A7Q9P2U7 560 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 TIMM22Q9Y584 194 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 COPG1Q9Y678 874 aaKnown RBP15.02■□□□□ -0
TRIM28-213ENST00000598355 CLCA3PQ9Y6N3 262 aa15.02■□□□□ -0
TRIM28-213ENST00000598355 MYOCOSA0A1B0GUC4 107 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 C17orf105B2RV13 164 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 TCP11X1B4DZS4 312 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 NPIPB8E9PQR5 432 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 F10P00742 488 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 IFNA16P05015 189 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 ALOX15P16050 662 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-213ENST00000598355 CREB1P16220 341 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 ETV4P43268 484 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 UQCRFS1P47985 274 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 MAPK12P53778 367 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 TRA2BP62995 288 aaKnown RBP15.01□□□□□ -0.01
TRIM28-213ENST00000598355 NDUFAF5Q5TEU4 345 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 ZNF468Q5VIY5 522 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-213ENST00000598355 OR4N5Q8IXE1 308 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 C1orf52Q8N6N3 182 aaKnown RBP15.01□□□□□ -0.01
TRIM28-213ENST00000598355 OR6Y1Q8NGX8 325 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 TCP10LQ8TDR4 215 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 GRHL3Q8TE85 626 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 UCN3Q969E3 161 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 FBXL20Q96IG2 436 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 DGAT2Q96PD7 388 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 FAM111AQ96PZ2 611 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 TAAR6Q96RI8 345 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 UTP23Q9BRU9 249 aaKnown RBP15.01□□□□□ -0.01
TRIM28-213ENST00000598355 GATA5Q9BWX5 397 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-213ENST00000598355 DEFB126Q9BYW3 111 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 IQCGQ9H095 443 aaKnown RBP15.01□□□□□ -0.01
TRIM28-213ENST00000598355 WDR41Q9HAD4 459 aa15.01□□□□□ -0.01
TRIM28-213ENST00000598355 MCM8Q9UJA3 840 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms