RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ZNF24P17028 368 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 GCAP28676 217 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 ARL1P40616 181 aaPredicted RBP13.99□□□□□ -0.17
LIG1-215ENST00000597901 HK2P52789 917 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 FOLH1Q04609 750 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 ADGRD1Q6QNK2 874 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 CYP20A1Q6UW02 462 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 Q6ZPB1 254 aaPredicted RBP13.99□□□□□ -0.17
LIG1-215ENST00000597901 DGAT2L6Q6ZPD8 337 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 MILR1Q7Z6M3 343 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 GPALPP1Q8IXQ4 340 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 C16orf52Q8NHV5 167 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 ASB15Q8WXK1 588 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 UCN3Q969E3 161 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 CCDC120Q96HB5 630 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 NSUN5Q96P11 429 aaKnown RBP13.99□□□□□ -0.17
LIG1-215ENST00000597901 DGAT2Q96PD7 388 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 RASL10BQ96S79 203 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 SERPINI1Q99574 410 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 MRPL46Q9H2W6 279 aaKnown RBP13.99□□□□□ -0.17
LIG1-215ENST00000597901 TIMMDC1Q9NPL8 285 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 LYARQ9NX58 379 aaKnown RBP13.99□□□□□ -0.17
LIG1-215ENST00000597901 SUCOQ9UBS9 1254 aaKnown RBP13.99□□□□□ -0.17
LIG1-215ENST00000597901 PPT2Q9UMR5 302 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 SPTAN1Q13813 2472 aaKnown RBP13.99□□□□□ -0.17
LIG1-215ENST00000597901 A0A0A6YYD5 115 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 A8MVJ9 347 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 PPP6CO00743 305 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 RIPK2O43353 540 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 PRKRAO75569 313 aaKnown RBP13.98□□□□□ -0.17
LIG1-215ENST00000597901 OR6B1O95007 311 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 FAM153BP0C7A2 387 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 COX7A2P14406 83 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 RFC3P40938 356 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 BUD31P41223 144 aaPredicted RBP13.98□□□□□ -0.17
LIG1-215ENST00000597901 SOX3P41225 446 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 CDH13P55290 713 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 HSF1Q00613 529 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 TNFRSF17Q02223 184 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 ZNF750Q32MQ0 723 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 FAM153CQ494X1 144 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 TEX35Q5T0J7 233 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 FRG2Q64ET8 278 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 TTC19Q6DKK2 380 aaPredicted RBP13.98□□□□□ -0.17
LIG1-215ENST00000597901 MTFR2Q6P444 385 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 MRGPRGQ86SM5 289 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 LURAP1LQ8IV03 231 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 CHERPQ8IWX8 916 aaKnown RBP13.98□□□□□ -0.17
LIG1-215ENST00000597901 SLC34A3Q8N130 599 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 GHDCQ8N2G8 530 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 ZFP62Q8NB50 900 aaPredicted RBP13.98□□□□□ -0.17
LIG1-215ENST00000597901 DOK4Q8TEW6 326 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 ITLN2Q8WWU7 325 aaPredicted RBP13.98□□□□□ -0.17
LIG1-215ENST00000597901 MAGED4Q96JG8 741 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 FRG2BQ96QU4 278 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 SEMA4BQ9NPR2 832 aaPredicted RBP13.98□□□□□ -0.17
LIG1-215ENST00000597901 HPF1Q9NWY4 346 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 TINAGQ9UJW2 476 aa13.98□□□□□ -0.17
LIG1-215ENST00000597901 DOPEY1Q5JWR5 2465 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 GLOD5A6NK44 160 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 HRKO00198 91 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 ZNF354AO60765 605 aaPredicted RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 GBAP04062 536 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 IGKV3-11P04433 115 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 RHOXF2BP0C7M4 288 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 ESRRAP11474 423 aaPredicted RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 ALOX15P16050 662 aaPredicted RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 GPR85P60893 370 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 TRAF3Q13114 568 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 ART3Q13508 389 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 SLC29A2Q14542 456 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 MPEG1Q2M385 716 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 SGO1Q5FBB7 561 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 PIGGQ5H8A4 983 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 BNC2Q6ZN30 1099 aaPredicted RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 RPS27LQ71UM5 84 aaKnown RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 DOLPP1Q86YN1 238 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 ST13P4Q8IZP2 240 aaPredicted RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 PSD4Q8NDX1 1056 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 OR4F6Q8NGB9 312 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 ZNF483Q8TF39 744 aaPredicted RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 MTBPQ96DY7 904 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 RHOXF2Q9BQY4 288 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 RUBCNLQ9H714 662 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 DEPPQ9NTK1 212 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 AHSPQ9NZD4 102 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 TMEM216Q9P0N5 145 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 COPS7AQ9UBW8 275 aa13.97□□□□□ -0.17
LIG1-215ENST00000597901 SPTBN1Q01082 2364 aaKnown RBP13.97□□□□□ -0.17
LIG1-215ENST00000597901 ZGRF1Q86YA3 2104 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 A0A1B0GTL3 188 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 ENO4A6NNW6 628 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 A8MT66 165 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 PGRMC2O15173 223 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 DYRK3O43781 588 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 HS6ST1O60243 411 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 SEMA3DO95025 777 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 KLK1P06870 262 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 RPS17P08708 135 aaKnown RBP13.96□□□□□ -0.17
LIG1-215ENST00000597901 ABOP16442 354 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms