RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 CNPPD1Q9BV87 410 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 PHACTR1Q9C0D0 580 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 ROGDIQ9GZN7 287 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 GRPEL1Q9HAV7 217 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 IL1RL2Q9HB29 575 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 SACM1LQ9NTJ5 587 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 GRHL1Q9NZI5 618 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 COPS7AQ9UBW8 275 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 ATG4BQ9Y4P1 393 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 FAM215AQ9Y5M1 114 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 SPACA6W5XKT8 324 aa9.73□□□□□ -0.85
LSM4-205ENST00000597776 NF1P21359 2839 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 OR14I1A6ND48 311 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 FIGNL2A6NMB9 653 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 K7EPI3 171 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 BCKDKO14874 412 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 RAD51CO43502 376 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 LRATO95237 230 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 NADKO95544 446 aaPredicted RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 IGKV3-11P04433 115 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 COX7A2P14406 83 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ENDOUP21128 410 aaKnown RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 ADH7P40394 386 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 CASP2P42575 452 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 STT3AP46977 705 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 IGLV3-21P80748 117 aaPredicted RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 FOLH1Q04609 750 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ILF2Q12905 390 aaKnown RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 CALCOCO2Q13137 446 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 E2F2Q14209 437 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ZNF791Q3KP31 576 aaPredicted RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 KBTBD12Q3ZCT8 623 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 PIGGQ5H8A4 983 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 PRAMEF20Q5VT98 475 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 KHDRBS2Q5VWX1 349 aaKnown RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 C18orf63Q68DL7 685 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 OR4C11Q6IEV9 310 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ADGRD1Q6QNK2 874 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 LYPD8Q6UX82 237 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 B3GNT6Q6ZMB0 384 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 SPNS3Q6ZMD2 512 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 RAPH1Q70E73 1250 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ISCA2Q86U28 154 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 TMEM200AQ86VY9 491 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 MYLK4Q86YV6 388 aaPredicted RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 LIX1LQ8IVB5 337 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 PPM1NQ8N819 430 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 BBOF1Q8ND07 529 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 HUS1BQ8NHY5 278 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 NRGNQ92686 78 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 UBE2E3Q969T4 207 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ATOH8Q96SQ7 321 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ZNF559Q9BR84 538 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ERP44Q9BS26 406 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 TTYH2Q9BSA4 534 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 RPF2Q9H7B2 306 aaKnown RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 IGSF5Q9NSI5 407 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 NUDT4Q9NZJ9 180 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 WHRNQ9P202 907 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 SPRR3Q9UBC9 169 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 OPTCQ9UBM4 332 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 ACAD8Q9UKU7 415 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 PYCARDQ9ULZ3 195 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 EML6Q6ZMW3 1958 aa9.72□□□□□ -0.85
LSM4-205ENST00000597776 PHF3Q92576 2039 aaKnown RBP9.72□□□□□ -0.85
LSM4-205ENST00000597776 INTS1Q8N201 2190 aaKnown RBP9.71□□□□□ -0.85
LSM4-205ENST00000597776 DNAJC13O75165 2243 aa9.71□□□□□ -0.85
LSM4-205ENST00000597776 TRGV5A0A0B4J1U4 118 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 A0A0G2JNJ9 132 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 A0A1B0GVC2 190 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 FAM187AA6NFU0 413 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 LRRC14BA6NHZ5 514 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 WASHC1A8K0Z3 465 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 FOXO6A8MYZ6 492 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 PLPP1O14494 284 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 AQP7O14520 342 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.86
LSM4-205ENST00000597776 KLK8O60259 260 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 KERAO60938 352 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 HOXD4P09016 255 aaPredicted RBP9.71□□□□□ -0.86
LSM4-205ENST00000597776 RFPL3SP0C7P2 107 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 SPRP35270 261 aaPredicted RBP9.71□□□□□ -0.86
LSM4-205ENST00000597776 MAN2A2P49641 1150 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 RAP1GDS1P52306 607 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 HNRNPH2P55795 449 aaKnown RBP9.71□□□□□ -0.86
LSM4-205ENST00000597776 DLX5P56178 289 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 HERVK_113P63132 956 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 ERVK-8P63133 956 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 IRF9Q00978 393 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 PLIN5Q00G26 463 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 TNFRSF17Q02223 184 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 C2orf54Q08AI8 447 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 MYBPHQ13203 477 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 SLC10A1Q14973 349 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 MPEG1Q2M385 716 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 HYAL4Q2M3T9 481 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 C1orf185Q5T7R7 199 aa9.71□□□□□ -0.86
LSM4-205ENST00000597776 DEPDC1Q5TB30 811 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms